Inoue-Murayama M, Ueda Y, Yamashita T, Nishida-Umehara C, Matsuda Y, Masegi T, Ito S. Molecular sexing of Japanese cormorants used for traditional fishing on the Nagara River in Gifu City. Animal Science Journal 73: 417–420, 2002.
Kobayashi T, Murai A, Okada T, Okumura J. Influence of dietary phosphorus level on growth performance in chicks given corn-soybean diet supplemented with amylase and acid protease. Animal Science Journal 73: 215-220, 2002.
Kuroiwa A, Uchikawa M, Kamachi Y, Kondoh H, Nishida-Umehara C, Masabanda J, Griffin DK, Matsuda Y. Chromosome assignment of eight SOX family genes in chicken. Cytogenetic and Genome Research 98: 189–193, 2002.
Kuroiwa A, Yokomine T, Sasaki H, Tsudzuki M, Tanaka K, Namikawa T, Matsuda Y. Biallelic expression of Z-linked genes in male chickens. Cytogenetic and Genome Resesrch 99: 310–314, 2002.
Murai A, Kobayashi T, Okada T, Okumura J. Improvement of growth and nutritive value in chicks with non-genetically modified phytase from Aspergillus niger. British Poultry Science 43: 700-708, 2002.
Sakimura M, Tsukada A, Usami M, Hanzawa S, Saito N, Ohno Y, Shimada K. Effect of estradiol and nonylpehnol on mRNA expression of estrogen receptors a and b, and cytochrome P450 aroamtase in the gonad of chicken embryos. Journal of Poultry Science 39: 302-309, 2002.
Sakimura M, Usami M, Hanzawa S, Tsukada A, Saito N, Ohno Y, Shimada K. Suppression effect of p-nonylphenol on male-specific mRNA expression in the embryonic gonad of chickens. Journal of Poultry Science 39: 91-99, 2002
Shibusawa M, Nishida-Umehara C, Masabanda J, Griffin DK, Isobe T, Matsuda Y．Chromosome rearrangements between chicken and guinea fowl defined by comparative chromosome painting and FISH mapping of DNA clones. Cytogenetic and Genome Research 98: 225–230, 2002.
Takami H, Watanabe H, Ohmori Y, Park H-M, Muramatsu T. Human alkaline phosphatase expression and secretion into chicken eggs after in vivo gene electroporation in the oviduct of laying hens. Biochemical and Biophysical Research Communications 292: 88-93, 2002.
Yamada K, Nishida-Umehara C, Matsuda Y. Characterization and chromosomal distribution of novel satellite DNA sequences of the lesser rhea (Pterocnemia pennata) and the greater rhea (Rhea americana). Chromosome Research. 10: 513–523, 2002.
Yamada K, Shibusawa M, Tsudzuki M, Matsuda Y. Molecular cloning and characterization of novel centromeric repetitive DNA sequences in the blue-breasted quail (Coturnix chinensis, Galliformes). Cytogenetic and Genome Research 98: 255–261, 2002.
Yamamoto I, Tsukada A, Saito N, Shimada K. cDNA cloning and mRNA expression of transformer 2 (Tra2) in chicken embryo. Biochimica et Biophysica Acta 1579: 185-188, 2002.
Yasuo S, Yoshimura T, Bartell PA, Iigo M, Makino E, Okabayashi N, Ebihara S. Effect of melatonin administration on qPer2, qPer3, and qClock gene expression in the suprachiasmatic nucleus of Japanese quail. European Journal of Neuroscience 16: 1541-1546, 2002.
Hu M, Naito J, Chen Y, Ohmori Y, Fukuta, K. Afferent and efferent connections of the nucleus rotundus demonstrated by WGA-HRP in the chick. Anatomia Histologia Embryologia 32: 335-340, 2003.
Ichikawa K, Ha Y, Tsukada A, Saito N, Shimada K. Effect of endocrine disrupters on mRNA expression of vitellogenin (VTG) II and very low density lipoprotein (apoVLDL) II in the liver of quail embryos. Journal of Poultry Science 40: 45-52, 2003.
Ichikawa K, Yamamoto I, Tsukada A, Saito N, Shimada K. cDNA cloning and mRNA expression of estrogen receptor a in Japanese quail. Journal of Poultry Science 40: 121-129, 2003.
Kayang BB, Mizutani M, Ito S. Twenty-eight new microsatellite loci in chicken and their cross-species amplification in Japanese quail and guinea fowl. Animal Science Journal 74: 255-259, 2003.
Matsushima Y, Matsumura K, Ishii S, Inagaki H, Suzuki T, Matsuda Y, Beck K, Kitagawa Y. Functional domains of chicken mitochondrial transcription factor A for the maintenance of mitochondrial DNA copy number in lymphoma cell line DT40. Journal of Biological Chemistry 278: 31149–31158, 2003.
Mizutani M. The Japanese quail. In The relationship between indigenous animals and humans in APEC region, Edited by Hsiu-Luan Chang and Yu-Chia Hang. pp.143-163, Chinese Society of Animal Science, 2003.
Naito R, Murofusa T, Mizutani M, Kaga K. Myelin-deficiency in the cochler nerve of ‘bt’ mutant hamster. Hearing Research 176: 17-24. 2003.
Nishijima K, Esaka K, Ibuki H, Ono K, Miyake K, Kamihira M, Iijima S. Simple assay method for endocrine disrupters by in vitro quail embryo culture: Nonylphenol acts as a weak estrogen in quail embryos. Journal of Bioscience and Bioengineering 95: 612-617, 2003.
Niwa T, Shibusawa M, Matsuda Y, Terashima A, Nakamura A, Shiojiri N. The Bh (black at hatch) gene that causes abnormal feather pigmentation maps to chromosome 1 of Japanese quail. Pigment Cell Research 16: 656–661, 2003.
Okabayashi N, Yasuo S, Watanabe M, Namikawa T, Ebihara S, Yoshimura T. Ontogeny of circadian clock gene expression in the pineal and the suprachiasmatic nucleus of chick embryo. Brain Research 990: 231-234, 2003.
Ohkubo T, Tsukada A, Shamoto K. cDNA cloning of chicken orexin receptor and tissue distribution: sex dimorphic expression in chicken gonads. Journal of Molecular Endocrinology 31: 499-508, 2003.
Ohmori Y, Suzuki M, Fukuta K. Anatomical relationship between enkephalin-containing neurones and caecum-projecting neurones in the chicken intestinal nerve. Anatomia Histologia Embryologia 32: 179-182, 2003.
Ono K, Kamihira M, Kuga Y, Matsumoto H, Hotta A, Itoh T, Nishijima K, Nakamura N, Matsuda H, Iijima S. Production of anti-prion scFv-Fc fusion proteins by recombinant animal cells. Journal of Bioscience and Bioengineering 95: 231-238, 2003.
Takeuchi J-K, Koshiba-Takeuchi K, Suzuki T, Kamimura M, Ogura K, Ogura T. Tbx5 and Tbx4 trigger limb initiation through activation of the Wnt/Fgf signaling cascade. Development 130: 2729-2739, 2003.
Upi Chairun Nisa, Tsukada A, Mori M, Saito N, Shimada K. Expression of protgamine mRNA in relation to spermatogenic activity in Japanese quail. Journal of Poultry Science 40: 309-318, 2003.
Yamamoto I, Tsukada A, Saito N, Shimada K. Profiling of mRNA expression of genes related to sex differentiation of the gonads in the chicken embryo. Poultry Science 82: 1462-1467, 2003.
Yoshimura T, Yasuo S, Watanabe M, Iigo M, Yamamura T, Hirunagi K, Ebihara S. Light-induced hormone conversion of T4 to T3 regulates photoperiodic response of gonads in birds. Nature 426: 178-181, 2003.
Yoshizawa K, Inaba K, Mizutani M, Tsuji S. Analyses of beta-1 syntrophin, syndecan 2 and Gem GTPase as candidate for chicken muscular dystrophy. Experimental Animals 52: 391-396. 2003.
Yasuo S, Watanabe M, Okabayashi N, Ebihara S, Yoshimura T. Circadian clock genes and photoperiodism: Comprehensive analysis of clock gene expression in the mediobasal hypothalamus, the suprachiasmatic nucleus, and the pineal gland of Japanese quail under various light schedules. Endocrinology 144: 3742-3748, 2003.
Frank ME, Wada Y, Mizutani M, Brizard DA. Variation in intake of sweet and bitter solutions by inbred strains of golden hamsters. Behavior Genetics 34: 465-476, 2004.
Ha Y, Tsukada A, Saito N, Shimada K. Changes in mRNA expression of MMP-2 in the Müllerian duct of chicken embryo. General and Comparative Endocrinology 139: 131-136, 2004.
Hu M, Naito J, Chen Y, Ohmori Y, Fukuta, K. Afferent and efferent connections of the nucleus geniculatus lateralis ventralis demonstrated by WGA-HRP in the chick. Anatomia Histologia Embryologia 33: 192-195, 2004.
Hu M, Naito J, Chen Y, Ohmori Y, Fukuta, K. Morphological characteristics of tectal neurons of layer I projecting to the nucleus geniculatus lateralis ventralis in chick. Journal of Veterinary Medical Science 66: 1015-1016, 2004.
Masabanda JS, Burt DW, O'Brien PC, Vignal A, Fillon V, Walsh PS, Cox H, Tempest HG, Smith J, Habermann F, Schmid M, Matsuda Y, Ferguson-Smith MA, Crooijmans RPMA, Groenen MAM, Griffin DK. Molecular cytogenetic definition of the chicken genome: the first complete avian karyotype. Genetics 166: 1367–1373, 2004.
Shibusawa M, Nishibori M, Nishida-Umehara C, Tsudzuki M, Masabanda J, Griffin DK, Matsuda Y. Karyotypic evolution in the Galliformes: An examination of the process of karyotypic evolution by comparison of the molecular cytogenetic findings with the molecular phylogeny. Cytogenetic and Genome Research 106: 111–119, 2004.
Shibusawa M, Nishida-Umehara C, Tsudzuki M, Masabanda J, Griffin DK, Matsuda Y. A comparative karyological study of the blue-breasted quail (Coturnix chinensis, Phasianidae) and California quail (Callipepla californica, Odontophoridae). Cytogenetic and Genome Research 106: 82– 90, 2004.
Sugiyama A, Murayama M, Miwa M, Ohashi R, Kayang BB, Mizutani M, Nirasawa K, Odai M, Minezawa M, Watanabe S, Ito, S. Polymorphism of dopamine D4 exon 1 corresponding region in chicken. Zoological Science 21: 941-946, 2004.
Suzuki T, Takeuchi J, Koshiba-Takeuchi K, Ogura T. Tbx genes specify posterior digit identity through Shh and BMP signaling. Developmental Cell 16: 43-53, 2004.
Tachibana T, Saito S, Tomonaga S, Takagi T, Saito E, Nakanishi T, Koutoku T, Tsukada A, Ohkubo T, Boswell T, Furuse M. Effect of central administration of prolactin-releasing peptide on feeding in chicks. Physiology & Behavior 80: 713-719, 2004.
Tatumi R, Mizutani M, Soukawa Y. Function of ubiquitin-like domain of chicken 2’-5’-oligoadenylate synthetase in conformational stability. J. Interf. Cytokine Research 23: 667-676, 2004.
Xiao Y, Hughes AL, Ando J, Matsuda Y, Cheng JF, Skinner-Noble D, Zhang G. A genome-wide screen identifies a single β-defensin gene cluster in the chicken: implications for the origin and evolution of mammalian defensins. BMC Genomics 5: 56–66, 2004.
Yamada K, Nishida-Umehara C, Matsuda Y. A new family of satellite DNA sequences as a major component of centromeric heterochromatin in owls (Strigiformes). Chromosoma 112: 277–287. (Erratum. Chromosoma 112:372–373), 2004.
Yamamura T, Hirunagi K, Ebihara S, Yoshimura T. Seasonal morphological changes in the neuro-glial interaction between gonadotropin-releasing hormone nerve terminals and glial endfeet in Japanese quail. Endocrinology 145: 4264-4267, 2004.
Yasuo S, Ebihara S, Yoshimura T. Circadian expression of clock gene in the optic tectum of Japanese quail. Brain Research 1005: 193-196, 2004.
Yasuo S, Ebihara S, Yoshimura T. Oral thyroxine administration mimics photoperiodically induced gonadal growth in Japanese quail. Animal Science Journal 75: 407-410, 2004.
Yasuo S, Watanabe M, Tsukada A, Takagi T, Iigo M, Shimada K, Ebihara S, Yoshimura T. Photoinducible phase specific light induction of Cry1 gene in the pars tuberalis of Japanese quail. Endocrinology 145: 1612-1616, 2004.
Yoshimura T. Molecular bases for seasonal reproduction in birds. Journal of Poultry Science 41: 251-258, 2004.
Yoshizawa K, Mannen H, Kikuchi T, Mizutani M, Tsuji S. Fine mapping of the muscular dystrophy (AM) gene on chicken chromosome 2q. Animal Genetics 35: 397-400, 2004.
Ebihara S, Yasuo S, Yoshimura T. Melatonin regulation of clock genes in birds. Functional Avian Endocrinology Dawson A, Sharp PJ eds., Narosa Publishing House, New Delhi pp. 215-222, 2005.
Fujiwara A, Mizutani M, Ono T, Kagami H. “Recessive black”: A plumage color mutant in Japanese quail. J. Poultry Science 42: 64-69, 2005.
Kamihira M, Ono K, Esaka K, Nishijima K, Kigaku R, Komatsu H, Yamashita T, Kyogoku K, Iijima S. High-level expression of single-chain Fv-Fc fusion protein in serum and egg white of genetically manipulated chickens using a retroviral vector. Journal of Virology 79: 10864-10874, 2005.
Kikuchi S, Fujima D, Sasazaki S, Mizutani M, Fujiwara A, Mannen H. Construction of genetic linkage map of Japanese quail (Coturnix japonica) based on AFLP and microsatellite markers. Animal Genetics 36: 227-231, 2005.
Matsuda Y, Nishida-Umehara C, Tarui H, Kuroiwa A, Yamada K, Isobe T, Ando J, Fujiwara A, Hirao Y, Nishimura O, Ishijima J, Hayashi A, Saito T, Murakami T, Murakami Y, Kuratani S, Agata K. Highly conserved linkage homology between birds and turtles: Bird and turtle chromosomes are precise counterparts of each other. Chromosome Research 13: 601–615, 2005.
Saito F, Blank M, Schroder J, Manya H, Shimizu T, Campbell KP, Endo T, Mizutani M, Kroger S, Matsumura K. Aberrant glycosylation of α-dystroglycan causes defective binding of laminin in the muscle of chicken muscular dystrophy. FEBS Letters 579: 2359-2363, 2005.
Saito N, Ikegami H, Shimada K. Effect of water deprivation on aquaporin 4 (AQP4) mRNA expression in chickens (Gallus domesticus). Molecular Brain Research 141: 193-197, 2005.
Upi Chairun Nisa, Tsukada A, Takagi S, Yamamoto I, Ha Y, Hrabia A, Saito N, Shimada K. Identification of spermatogenic cells expressing protamine mRNA in Japanese quail by RT-PCR. Journal of Poultry Science 42: 70-78, 2005.
Shibuya K, Mizutani M, Sato K, Itabashi M, Nunoya, T. Comparative evaluation of sex reversal effects of natural and synthetic estrogens in sex reversal test using F1 (AWE×WE) Japanese quail embryos. J. Poultry Science 42: 119-129, 2005.
Shibuya K, Wada M, Mizutani M, Sato K, Itabashi M, Sakamoto T. Vitellogenin detection and chick pathology are useful endpoints to evaluate endocrine disrupting effects in avian one-generation reproduction study. Environmental Toxicology and Chemistry 24: 1654-1666, 2005.
Tachibana T, Tsukada A, Fujimoto M, Takahashi H, Ohkubo T, Boswell T, Furuse M. Comparison of mammalian prolactin-releasing peptide and Carassius RFamide for feeding behavior and prolactin secretion in chicks. General and Comparative Endocrinology 144: 264-269, 2005
Yasuo S, Watanabe M, Nakao N, Takagi T, Follett BK, Ebihara S, Yoshimura T. The reciprocal switching of two thyroid hormone activating and inactivating enzyme genes is involved in the photoperiodic gonadal response of Japanese quail. Endocrinology 146: 2551-2554, 2005.
Yokomine T, Shirohzu H, Purbowasito W, Toyoda A, Iwama H, Ikeo K, Hori T, Mizuno S, Tsudzuki M, Matsuda Y, Hattori M, Sakaki Y, Sasaki H. Structural and functional analysis of a 0.5-Mb chicken region orthologous to the imprinted mammalian Ascl2/Mash2-Igf2-H19 region. Genome Research 15: 154–165, 2005.
Yoshimura T, Yasuo S, Yamamura T, Nakao N, Ebihara S. Photoperiodic time measurement. Functional Avian Endocrinology Dawson A, Sharp PJ eds., Narosa Publishing House, New Delhi pp. 141-150, 2005.
Fujiwara A, Mizutani M, Ono T, Kagami, H. Introduction of genes relating to muscular dystrophy into chimeric chickens by embryo engineering. In: Animal Cell Technol. Basic & Applied Aspects. Iijima S, Nishijima K. eds.) pp. 127-133, Springer, 2006.
Hotta A, Saito Y, Nishijima K, Kamihira M, Iijima S. Characterization of transient expression system for retroviral vector production. Journal of Bioscience and Bioengineering 101: 361-368, 2006.
Kawabe Y, Kamihira M, Ono K, Kyogoku K, Nishijima K, Iijima S. Production of scFv-Fc fusion protein using genetically manipulated quails. Journal of Bioscience and Bioengineering 102: 297-303, 2006.
Kawabe Y, Naka T, Ando-Noumi N, Matsumoto H, Ono K, Nishijima K, Kamihira M, Iijima S. Transport of human immunoglobulin G and Fc-fusion protein to chicken egg yolk. Journal of Bioscience and Bioengineering 102: 518-523, 2006.
Matsubara K, Tarui H, Toriba M, Yamada K, Nishida-Umehara C, Agata K, Matsuda Y. Evidence for different origin of sex chromosomes in snakes, birds and mammals, and step-wise differentiation of snake sex chromosomes. Proceedings of the National Academy of Science of the U.S.A. 103: 18190–18195, 2006.
Miwa M, Inoue-Murayama M, Kobayashi N, Kayang BB, Mizutani M, Takahashi H, Ito, S. Mapping of panda plumage color locus on the microsatellite linkage map of the Japanese quail. BMC Genetics, Jan. 12; 7-12, 2006.
Mizushima S, Saito N, Shimada K. Cloning of cDNA and mRNA expression of androgen receptor in male Japanese quail (Coturnix coturnix japonica). Journal of Poultry Science 43: 173-179, 2006.
Morshed M, Ando M, Yamamoto J, Hotta A, Kaneoka H, Kojima J, Nishijima Ken-ichi, Iijima S. YY1 binds to regulatory element of chicken lysozyme and ovalbumin promoters. Cytotechnology 52: 159-170, 2006.
Morshed M, Sano S, Nishimiya D, Ando M, Nishijima K, Iijima S. Chicken ovalbumin promoter is demethylated upon expression in the regions specifically involved in estrogen-responsiveness. Bioscience Biotechnology and Biochemistry 70: 1438-1446, 2006.
Nakao N, Takagi T, Iigo M, Tsukamoto T, Yasuo S, Masuda T, Yanagisawa T, Ebihara S, Yoshimura T. Possible involvement of organic anion transporting polypeptide 1c1 in the photoperiodic response of gonads in birds. Endocrinology 147: 1067-1073, 2006.
Terasaki AG, Suzuki H, Ando J, Matsuda Y, Ohashi K. Chromosomal assignment of LASP1 and LASP2 genes and organization of the LASP2 gene in chicken. Cytogenetic and Genome Research 112: 141–147, 2006.
Yamada K, Nishida-Umehara C, Ishijima J, Murakami T, Shibusawa M, Tsuchiya K, Tsudzuki M, Matsuda Y. A novel family of repetitive DNA sequences amplified site-specifically on the W chromosomes in Neognathous birds. Chromosome Research 14: 613–627, 2006.
Yamamura T, Yasuo S, Hirunagi K, Ebihara S, Yoshimura T. T3 implantation mimics photoperiodically reduced encasement of nerve terminals by glial processes in the median eminence of Japanese quail. Cell and Tissue Research 324: 175-179, 2006.
Yasuo S, Watanabe M, Iigo M, Yamamura T, Nakao N, Takagi T, Ebihara S, Yoshimura T. Molecular mechanism of photoperiodic time measurement in the brain of Japanese quail. Chronobiology International 23: 307-315, 2006.
Yoshimura T. Molecular mechanism of the photoperiodic response of gonads in birds and mammals. Comparative Biochemistry and Physiology A 144: 345-350, 2006.
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