名古屋大学 大学院生命農学研究科 生物化学研究室

研究業績Research publications

2021年〜

  • Hisae Kojima, Kanta Yamamoto, Takamasa Suzuki, Yuri Hayakawa, Tomoko Niwa, Kenro Tokuhiro, Satoshi Katahira, Tetsuya Higashiyama, and Sumie Ishiguro:
    Broad Chain Length Specificity of the Alkane-Forming Enzymes NoCER1A and NoCER3A/B in Nymphaea odorata.
    Plant and Cell Physiology, , in press, DOI: 10.1093/pcp/pcad168
    [open access link]
  • Md. Firose Hossain, Amit Kumar Dutta, Takamasa Suzuki, Tetsuya Higashiyama, Chiharu Miyamoto, Sumie Ishiguro, Takanori Maruta, Yuki Muto, Kohji Nishimura, Hideki Ishida, Mostafa Aboulela, Takushi Hachiya, Tsuyoshi Nakagawa:
    Targeted expression of bgl23-D, a dominant-negative allele of ATCSLD5, affects cytokinesis of guard mother cells and exine formation of pollen in Arabidopsis thaliana.
    Planta, 257, 64, DOI: 10.1007/s00425-023-04097-0
  • Yoichi Nakanishi, Terumi Kawashima, Mayuko Naganawa, Toshiyuki Mikami, Masayoshi Maeshima, Sumie Ishiguro:
    Letter to the Editor: Speedy Plant Genotyping by SDS-Tolerant Cyclodextrin-PCR.
    Plant and Cell Physiology, 63, 1025–1028 (2022), DOI: 10.1093/pcp/pcac093
    [open access link]
  • Masaki Miyaguchi, Yoichi Nakanishi, Andrés D. Maturana, Kimihiko Mizutani, Tomoaki Niimi:
    Conformational Change of theHairpin-like-structured Robo2Ectodomain Allows NELL1/2 Binding.
    Journal of Molecular Biology, 434, 167777 (2022), DOI: 10.1016/j.jmb.2022.167777
  • Kevin D. Oliphant, Marius Karger, Yoichi Nakanishi, Ralf R. Mendel:
    Precise Quantification of Molybdate In Vitro by the FRET-Based Nanosensor 'MolyProbe'.
    Molecules, 2022, 27, 3691 (2022), DOI: 10.3390/molecules27123691
    [open access link]
  • Yuji Nomoto, Hirotomo Takatsuka, Kesuke Yamada, Toshiya Suzuki, Takamasa Suzuki, Ying Huang, David Latrasse, Jing An, Magdolna Gombos, Christian Breuer, Takashi Ishida, Kenichiro Maeo, Miyu Imamura, Takafumi Yamashino, Keiko Sugimoto, Zoltán Magyar, László Bögre, Cécile Raynaud, Moussa Benhamed, Masaki Ito:
    A hierarchical transcriptional network activates specific CDK inhibitors that regulate G2 to control cell size and number in Arabidopsis.
    Nature Communications, 13, A1660 (2022), DOI: 10.1038/s41467-022-29316-2.
  • Takayuki Sakamoto, Nobuyuki Takatani, Kintake Sonoike, Haruhiko Jimbo, Yoshitaka Nishiyama, Tatsuo Omata:
    Dissection of the mechanisms of growth inhibition resulting from loss of the PII protein in the cyanobacterium Synechococcus elongatus PCC 7942.
    Plant and Cell Physiology, 62, 721-731 (2021), DOI: 10.1093/pcp/pcab030

2016年〜2020年

  • Dawei Xu, Palash Chandra Mondol, Sumie Ishiguro, Jianxin Shi, Dabing Zhang, Wanqi Liang:
    NERD1 is required for primexine formation and plasma membrane undulation during microsporogenesis in Arabidopsis thaliana.
    aBIOTECH, 1, 205-218 (2020).
  • Akiko Matsudaira, Yasushi Hoshino, Kazuma Uesaka, Nobuyuki Takatani, Tatsuo Omata, Yoshihiro Usuda:
    Production of glutamate and stereospecific flavors, (S)-linalool and (+)-valencene, by Synechocystis sp. PCC6803.
    Journal of Bioscience and Bioengineering, 130, 464-470 (2020).
  • Shin-Ichi Maeda, Risa Aoba, Yuma Nishino, Tatsuo Omata:
    A Novel Bacterial Nitrate Transporter Composed of Small Transmembrane Proteins.
    Plant and Cell Physiology, 60, 2180-2192 (2019).
  • Mst Momtaz Sultana, Amit Kumar Dutta, Yuji Tanaka, Mostafa Aboulela, Kohji Nishimura, Sayaka Sugiura, Tomoko Niwa, Kenichiro Maeo, Shino Goto-Yamada, Tetsuya Kimura, Sumie Ishiguro, Shoji Mano, Tsuyoshi Nakagawa:
    Gateway Binary Vectors with Organelle-Targeted Fluorescent Proteins for Highly Sensitive Reporter Assay in Gene Expression Analysis of Plant.
    Journal of Biotechnology, 297, 19-27 (2019).
  • Takamasa Suzuki, Tsutae Kawai, Shunsuke Takemura, Marie Nishiwaki, Toshiya Suzuki, Kenzo Nakamura, Sumie Ishiguro, and Tetsuya Higashiyama:
    Development of the Mitsucal computer system to identify causal mutation with a high‑throughput sequencer.
    Plant Reproduction, 31, 117-128 (2018).
  • Tomoko Niwa, Takamasa Suzuki, Yumiko Takebayashi, Rie Ishiguro, Tetsuya Higashiyama, Hitoshi Sakakibara and Sumie Ishiguro:
    Jasmonic acid facilitates flower opening and floral organ development through the upregulated expression of SlMYB21 transcription factor in tomato.
    Bioscience, Biotechnology, and Biochemistry, 82, 292-303 (2018).2018年 BBB論文賞受賞
    ---> Full-text manuscript.
  • Akihiro Kato, Nobuyuki Takatani, Kazutaka Ikeda , Shin-Ichi Maeda, Tatsuo Omata:
    Removal of the product from the culture medium strongly enhances free fatty acid production by genetically engineered Synechococcus elongatus.
    Biotechnology for Biofuels, 10, 141 (2017). https://doi.org/10.1186/s13068-017-0831-z
  • Mostafa Aboulela, Yuji Tanaka, Kohji Nishimura, Shoji Mano, Mikio Nishimura, Sumie Ishiguro, Tetsuya Kimura, and Tsuyoshi Nakagawa:
    Development of an R4 dual-site (R4DS) gateway cloning system enabling the efficient simultaneous cloning of two desired sets of promoters and open reading frames in a binary vector for plant research.
    PLoS ONE, 12, e0177889 (2017).
  • Toshiya Suzuki, Joan Oñate Narciso, Wei Zeng, Allison van de Meene, Masayuki Yasutomi, Shunsuke Takemura, Edwin R. Lampugnani, Monika S. Doblin, Antony Bacic, and Sumie Ishiguro:
    KNS4/UPEX1: A type II arabinogalactan β-(1,3)-galactosyltransferase required for pollen exine development.
    Plant Physiology, 173, 183-205 (2017).
  • Luca Santuari, Gabino F. Sanchez-Perez, Marijn Luijten, Bas Rutjens, Inez Terpstra, Lidija Berke, Maartje Gorte, Kalika Prasad, Dongping Bao, Johanna L. P. M. Timmermans-Hereijgers, Kenichiro Maeo, Kenzo Nakamura, Akie Shimotohno, Ales Pencik, Ondrej Novak, Karin Ljung, Sebastiaan van Heesch, Ewart de Bruijn, Edwin Cuppen, Viola Willemsen, Ari Pekka Mähönen, Wolfgang Lukowitz, Berend Snel, Dick de Ridder, Ben Scheres, and Renze Heidstraa:
    The PLETHORA gene regulatoly network guides growth and cell differentiation in Arabidopsis roots.
    Plant Cell, 28, 2937-2951 (2016).
  • Kouji Kojima, Sumie Keta, Kazuma Uesaka, Akihiro Kato, Nobuyuki Takatani, Kunio Ihara, Tatsuo Omata, Makiko Aichi:
    A simple method for isolation and construction of markerless cyanobacterial mutants defective in acyl-acyl carrier protein synthetase.
    Applied Microbiology and Biotechnology, 100, 10107–10113 (2016).
  • Akihiro Kato, Kazuhide Use, Nobuyuki Takatani, Kazutaka Ikeda, Miyuki Matsuura, Kouji Kojima, Makiko Aichi, Shin-Ichi Maeda, Tatsuo Omata:
    Modulation of the balance of fatty acid production and secretion is crucial for enhancement of growth and productivity of the engineered mutant of the cyanobacterium Synechococcus elongatus.
    Biotechnology for Biofuels, 9, 91 (2016). https://doi.org/10.1186/s13068-016-0506-1

2011〜2015年

  • Hironaka Tsukagoshi, Takamasa Suzuki, Kouki Nishikawa, Sakae Agarie, Sumie Ishiguro and Tetsuya Higashiyama:
    RNA-Seq analysis of the response of the halophyte, Mesembryanthemum crystallinum (Ice Plant) to high salinity.
    PLoS ONE, 10, e0118339 (2015).
  • Hideki Yoshida, Ko Hirano, Tomomi Sato, Nobutaka Mitsuda, Mika Nomoto, Kenichiro Maeo, Eriko Koketsu, Rie Mitani, Mayuko Kawamura, Sumie Ishiguro, Yasuomi Tada, Masaru Ohme-Takagi, Makoto Matsuoka and Miyako Ueguchi-Tanaka:
    DELLA protein functions as a transcriptional activator through the DNA binding of the INDETERMINATE DOMAIN family proteins.
    Proceedings of the National Academy of Sciences of USA, 111, 7861-7866 (2014).
  • Izabela Ruduś, Haruka Terai, Takafumi Shimizu, Hisae Kojima, Kazuki Hattori, Yuka Nishimori, Hironaka Tsukagoshi, Yuji Kamiya, Mitsunori Seo, Kenzo Nakamura, Jan Kępczyński and Sumie Ishiguro:
    Wound-induced expression of DEFECTIVE IN ANTHER DEHISCENCE1 and DAD1-Like Lipase genes is mediated by both CORONATINE INSENSITIVE1-dependent and independent pathways in Arabidopsis thaliana.
    Plant Cell Reports, 33, 849-860 (2014).
  • Weerasak Pitaksaringkarn, Sumie Ishiguro, Masashi Asahina and Shinobu Satoh:
    ARF6 and ARF8 contribute to tissue reunion in incised Arabidopsis inflorescence stems.
    Plant Biotechnology, 31, 49-53 (2014).
  • Tomoko Niwa, Tatsuhiko Kondo, Michi Nishizawa, Ryoko Kajita, Tatsuo Kakimoto and Sumie Ishiguro:
    EPIDERMAL PATTERNING FACTOR LIKE5 peptide represses stomatal development by inhibiting meristemoid maintenance in Arabidopsis thaliana.
    Bioscience, Biotechnology, and Biochemistry, 77, 1287-95 (2013).
  • Tatsuya Sakai, Susumu Mochizuki, Ken Haga, Yukiko Uehara, Akane Suzuki, Akiko Harada, Takuji Wada, Sumie Ishiguro and Kiyotaka Okada:
    The WAVY GROWTH 3 E3 ligase family controls the gravitropic response in Arabidopsis roots.
    The Plant Journal, 70, 303-314 (2012).
  • Minako Ueda, Keisuke Matsui, Sumie Ishiguro, Tomohiko Kato, Satoshi Tabata, Masatomo Kobayashi, Motoaki Seki, Kazuo Shinozaki and Kiyotaka Okada:
    Arabidopsis RPT2a encoding the 26S proteasome subunit is required for various aspects of root meristem maintenance, and regulates gametogenesis redundantly with its homolog, RPT2b.
    Plant and Cell Physiology, 52, 1628-1640 (2011).
  • Nozomi Haga, Kosuke Kobayashi, Takamasa Suzuki, Kenichiro Maeo, Minoru Kubo, Misato Ohtani, Nobutaka Mitsuda, Taku Demura, Kenzo Nakamura, Gerd Jürgens and Masaki Ito:
    Mutations in MYB3R1 and MYB3R4 cause pleiotropic developmental defects and preferential down-regulation of multiple G2/M-specific genes in Arabidopsis.
    Plant Physiology, 157, 706-717 (2011).

2010年までの主なもの

  • Sumie Ishiguro, Yuka Nishimori, Miho Yamada, Hiroko Saito, Toshiya Suzuki, Tsuyoshi Nakagawa, Hiroshi Miyake, Kiyotaka Okada and Kenzo Nakamura:
    The Arabidopsis FLAKY POLLEN1 gene encodes a 3-hydroxy-3-methylglutaryl-coenzyme A synthase required for development of tapetum-specific organelles and fertility of pollen grains.
    Plant and Cell Physiology, 51, 896-911 (2010).
  • Shinya Nakamura, Shoji Mano, Yuji Tanaka, Masato Ohnishi, Chihiro Nakamori, Masami Araki, Tomoko Niwa, Mikio Nishimura, Hironori Kaminaka, Tsuyoshi Nakagawa, Yutaka Sato and Sumie Ishiguro:
    Gateway binary vectors with bialaphos resistance gene, bar, as a selection marker for plant transformation.
    Bioscience, Biotechnology, and Biochemistry, 74, 1315-1319 (2010).
  • Ryo Tabata, Masaya Ikezaki,Takahiro Fujibe, Mitsuhiro Aida, Chang-en Tian, Yoshihisa Ueno, Kotaro T. Yamamoto, Yasunori Machida, Kenzo Nakamura and Sumie Ishiguro:
    Arabidopsis AUXIN RESPONSE FACTOR6 and 8 regulate jasmonic acid biosynthesis and floral organ development via repression of class 1 KNOX genes.
    Plant and Cell Physiology, 51, 164-175 (2010).
  • 石黒澄衞:
    ジャスモン酸の生合成
    植物のシグナル伝達 —— 分子と応答(柿本辰男ほか編)共立出版,pp. 23-30 (2010).
  • Toshiya Suzuki, Kanari Masaoka, Masatomo Nishi, Kenzo Nakamura and Sumie Ishiguro:
    Identification of kaonashi mutants showing abnormal pollen exine structure in Arabidopsis thaliana.
    Plant and Cell Physiology, 49, 1465-1477 (2008).
  • Tsuyoshi Nakagawa, Shinya Nakamra, Katsunori Tanaka, Makoto Kawamukai, Takamasa Suzuki, Kenzo Nakamura, Tetsuya Kimura and Sumie Ishiguro:
    Development of R4 Gateway binary vectors (R4pGWB) enabling high-throughput promoter swapping for plant research.
    Bioscience, Biotechnology, and Biochemistry, 72, 624-629 (2008).
  • Tsuyoshi Nakagawa, Takamasa Suzuki, Satoko Murata, Shinya Nakamura, Takeshi Hino, Kenichiro Maeo, Ryo Tabata, Tsutae Kawai, Katsunori Tanaka, Yasuo Niwa, Yuichiro Watanabe, Kenzo Nakamura, Tetsuya Kimura and Sumie Ishiguro:
    Improved Gateway binary vectors: High-performance vectors for creation of fusion constructs in transgenic analysis of plants.
    Bioscience, Biotechnology, and Biochemistry, 71, 2095-2100 (2007).
  • Sumie Ishiguro, Yuhko Watanabe, Natsuko Ito, Hideko Nonaka, Norimasa Takeda, Tomoko Sakai, Hiroshi Kanaya and Kiyotaka Okada:
    SHEPHERD is the Arabidopsis GRP94 responsible for the formation of functional CLAVATA proteins.
    The EMBO Journal, 21, 898-908 (2002).
  • Sumie Ishiguro, Akiko Kawai-Oda, Junichi Ueda, Ikuo Nishida and Kiyotaka Okada:
    The DEFECTIVE IN ANTHER DEHISCENCE1 gene encodes a novel phospholipase A1 catalyzing the initial step of jasmonic acid biosynthesis, which synchronizes pollen maturation, anther dehiscence, and flower opening in Arabidopsis.
    The Plant Cell, 13, 2191-2209 (2001).
  • Takatoshi Kagawa, Tatsuya Sakai, Noriyuki Suetsugu, Kazusato Oikawa, Sumie Ishiguro, Tomohiko Kato, Satoshi Tabata, Kiyotaka Okada and Masamitsu Wada:
    Arabidopsis NPL1: a phototropin homolog controlling the chloroplast high-light avoidance response.
    Science, 291, 2138-2141 (2001).
  • Sumie Ishiguro and Kenzo Nakamura:
    Characterization of a cDNA encoding a novel DNA-binding protein, SPF1, that recognizes SP8 sequences in the 5' upstream regions of genes coding for sporamin and β-amylase from sweet potato.
    Molecular and General Genetics, 244, 563-571 (1994).
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