［原著論文・総説（査読有り）］*: Corresponding author

<<2023年>>

150. Yamauchi, T.*, Tanaka, A., Nakazono, M. and Inukai, Y.: Age-dependent analysis dissects the stepwise control of auxin-mediated lateral root development in rice. Plant Physiology, in press.

149.Chen, X., Ru, Y., Takahashi, H., Nakazono, M., Shabala, S., Smith, S.* and Yu, M.*: Single-cell transcriptomic analysis of pea shoot development and cell-type-specific responses to boron deficiency. Plant Journal, in press.

148. Peralta Ogorek, L.L.*, Jimenez, JdlC., Visser, E.J.W., Takahashi, H., Nakazono, M., Shabala, S. and Pedersen, O.*: Outer apoplastic barriers in roots: prospects for abiotic stress tolerance. Functional Plant Biology, in press.

147. Sakurai, K., Toda, Y., Hamazaki, K., Ohmori, Y., Yamasaki, Y., Takahashi, H., Takanashi, H., Tsuda, M., Tsujimoto, H., Kaga, A., Nakazono, M., Fujiwara, T. and Iwata, H.*: Random regression for modeling soybean plant response to irrigation changes using time-series multispectral data. Frontiers in Plant Science, 14: 1201806 (2023)

146. Takahashi, H.*, Abo, C., Suzuki, H., Romsuk, J., Oi, T., Yanagawa, A., Gorai, T., Tomisaki, Y., Jitsui, M., Shimamura, S., Mori, H., Kaga, A., Ishimoto, M., Seki, H., Muranaka, T., Nakazono, M.: Triterpenoids in aerenchymatous phellem contribute to internal root aeration and waterlogging adaptability in soybeans. New Phytologist, 239: 936-948 (2023).

145. Ning, J., Yamauchi, T., Takahashi, H., Omori, F., Mano, Y. and Nakazono, M.*: Asymmetric auxin distribution establishes a contrasting pattern of aerenchyma formation in the nodal roots of Zea nicaraguensis during gravistimulation. Frontiers in Plant Science, 14: 1133009 (2023).

144. Peralta Ogorek, L.L.*, Takahashi, H., Nakazono, M. and Pedersen, O.*: The barrier to radial oxygen loss protects roots against hydrogen sulphide intrusion and its toxic effect. New Phytologist, 238: 1825-1837 (2023).

143. Ishimoto, K., Nosaka-Takahashi, M.*, Kishi-Kaboshi, M., Watanabe, T., Abe, K., Shimizu-Sato, S., Takahashi, H, Nakazono, M., Hirochika, H. and Sato, Y.*: Post-embryonic function of GLOBULAR EMBRYO 4 (GLE4)/OsMPK6 in rice development. Plant Biotechnology, 40: 9-13 (2023).

<<2022年>>

142. Bui, K.T., Naruse, T., Yoshida, H., Toda, Y., Ohmori, Y., Tsuda, M., Kaga, A., Yamasaki, Y., Tsujimoto, H., Ichihashi, Y., Yokota-Hirai, M., Fujiwara, T., Iwata, H., Matsuoka, M., Takahashi, H.* and Nakazono, M.*: Effects of irrigation on root growth and development of soybean: a 3-year sandy field experiment. Frontiers in Plant Science, 13: 1047563 (2022)

141. Rathnayaka Gamage, S.I., Kaewwongwal, A., Laosatit, K., Yimram, T., Lin, Y., Chen, X., Nakazono, M. and Somta, P.*: Tandemly duplicated genes encoding polygalacturonase inhibitors are associated with bruchid (Callosobruchus chinensis) resistance in moth bean (Vigna aconitifolia). Plant Science, 323: 111402 (2022).

140. Sakurai, K., Toda, Y., Kajiya-Kanegae, H., Omori, Y., Yamasaki, Y., Takahashi, H., Takanashi, H., Tsuda, M., Tsujimoto, H., Kaga, A., Nakazono, M., Fujiwara, T. and Iwata, H.*: Time-series multi-spectral imaging in soybean for improving biomass and genomic prediction accuracy. The Plant Genome, 15: e20244 (2022).

139. Yamauchi, T.* and Nakazono, M.: Modeling-based age-dependent analysis reveals the net patterns of ethylene-dependent and -independent aerenchyma formation in rice and maize roots. Plant Science, 321: 111340 (2022)

138. Toda, Y., Sasaki, G., Ohmori, Y., Yamasaki, Y., Takahashi, H., Takanashi, H., Tsuda, M., Kajiya-Kanegae, H., Lopez-Lozano, R., Tsujimoto, H., Kaga, A., Nakazono, M., Fujiwara, T., Baret, F. and Iwata, H*: Genomic prediction of green fraction dynamics in soybean using UAV observations. Frontiers in Plant Science, 13: 828864 (2022).

137. Kawai, T., Shibata, K., Akahoshi, R., Nishiuchi, S., Takahashi, H., Nakazono, M., Kojima, T., Nosaka-Takahashi, M., Sato, Y., Toyoda, A., Lucob-Agustin, N., Kano-Nakata, M., Suralta, R.R., Niones, J.M., Chen, Y., Siddique, K., Yamauchi, A. and Inukai, Y.*: WUSCHEL-related homeobox family genes in rice control lateral root primordium size. Proceedings of the National Academy of Sciences of the United States of America, 119: e2101846119 (2022).

<<2021年>>

136. Yamauchi, T.* and Nakazono, M.*: Mechanisms of lysigenous aerenchyma formation under abiotic stress. Trends in Plant Science, 27: 13-15 (2022).

135. Jimenez, JdlC.*, Pellegrini, E., Pedersen, O. and Nakazono, M.: Radial oxygen loss from plant roots - methods. Plants, 10: 2322 (2021)

134. Nishiuchi, S.*, Watanabe, K., Sato, S., Takahashi, H. and Nakazono, M.*: Expression analysis of genes for cytochrome P450 CYP86 and glycerol-3-phosphate acyltransferase related to suberin biosynthesis in rice roots under stagnant deoxygenated conditions. Plant Root, 15: 19-35 (2021)

133. Mano, Y.* and Nakazono, M.: Genetic regulation of root traits for soil flooding tolerance in genus Zea. Breeding Science, 71: 30-39 (2021)

132. Yamauchi, T.* Pedersen, O., Nakazono, M. and Tsutsumi, N.: Key root traits of Poaceae for adaptation to soil water gradients. New Phytologist, 229: 3133-3140 (2021)

131. Pedersen, O.*, Nakayama, Y., Yasue, H., Kurokawa, Y., Takahashi, H., Floytrup, A.H., Omori, F., Mano, Y., Colmer, T.D. and Nakazono, M.*: Lateral roots, in addition to the adventitious roots, form a barrier to radial oxygen loss in Zea nicaraguensis and a chromosome segment introgression line in maize. New Phytologist, 229: 94-105 (2021)

130. Pedersen, O., Sauter, M., Colmer, T.D. and Nakazono, M.*: Regulation of root adaptive anatomical and morphological traits during low soil oxygen. New Phytologist, 229: 42-49 (2021)

<<2020年>>

129. Noorrohmah, S., Takahashi, H. and Nakazono, M.*: Formation of a barrier to radial oxygen loss in L-type lateral roots of rice. Plant Root, 14: 33-41 (2020)

128. Yamauchi, T., Nakazono, M., Inukai, Y. and Tsutsumi N.*: Distance-to-time conversion using Gompertz model reveals age-dependent aerenchyma formation in rice roots. Plant Physiology, 183: 1424-1427 (2020)

127. Yamauchi, T.*, Tanaka, A., Tsutsumi, N., Inukai, Y. and Nakazono, M.*: A role for auxin in ethylene-dependent inducible aerenchyma formation in rice roots. Plants, 9: e610 (2020)

126. Qi, X., Takahashi, H.*, Kawasaki, Y., Ohta, Y., Isozaki, M., Kojima, M., Takebayashi, Y., Sakakibara, H., Imanishi, S., Chen, X. and Nakazono, M.: Differences in xylem development between Dutch and Japanese tomato (Solanum lycopersicum) correlate with cytokinin levels in hypocotyls. Annals of Botany, 126: 315-322 (2020)

<<2019年>>

125. Yamauchi, T.*, Tanaka, A., Inahashi, H., Nishizawa, N.K., Tsutsumi, N., Inukai, Y., and Nakazono, M.*: Fine control of aerenchyma and lateral root development through AUX/IAA and ARF-dependent auxin signaling. Proceedings of the National Academy of Sciences of the United States of America, 116: 20770-20775 (2019)

124. Ishimoto, K., Sonohara, S., Kaboshi-Kishi, M., Itoh, J., Hibara, K., Sato, Y., Watanabe, T., Abe, K., Miyao, A., Nosaka-Takahashi, M., Suzuki, T., Ta, N.K., Shimizu-Sato, S., Suzuki, T., Toyoda, A., Takahashi, H., Nakazono, M., Nagato, Y., Hirochika, H. and Sato, Y.*: Specification of the basal region identity after asymmetric zygotic division requires mitogen-activated protein kinase 6 in rice. Development, 146: dev176305 (2019)

123. Gong, F., Takahashi, H., Omori, F., Wang, W.*, Mano, Y.* and Nakazono, M.*: QTLs for constitutive aerenchyma from Zea nicaraguensis improve tolerance of maize to root-zone oxygen deficiency. Journal of Experimental Botany, 70: 6475-6487 (2019)

122. Osaka, M., Nabemoto, M., Maeda, S., Sakazono, S., Masuko-Suzuki, H., Ito, K., Takada, Y., Kobayashi, I., Lim, Y.P., Nakazono, M., Fujii, S., Murase, K., Takayama, S., Suzuki, G., Suwabe, K.* and Watanabe, M.*: Genetic and tissue-specific RNA-sequencing analysis of self-compatible mutant TSC28 in Brassica rapa L. toward identification of a novel self-incompatibility factor. Genes & Genetic Systems, 94: 167-176 (2019)

121. Colmer, T.D., Kotula, L., Malik, A.I., Takahashi, H., Konnerup, D., Nakazono, M. and Pedersen, O.*: Rice acclimation to soil flooding: low concentrations of organic acids can trigger a barrier to radial oxygen loss in roots. Plant, Cell & Environment, 42: 2183-2197 (2019).

120. Yamauchi, T.*, Abe, F., Tsutsumi, N. and Nakazono, M.: Root cortex provides a venue for gas-space formation and is essential for plant adaptation to waterlogging. Frontiers in Plant Science, 10: 259 (2019)

119. Ishimaru, T.*, Parween, S., Saito, Y., Shigemitsu, T., Yamakawa, H.*, Nakazono, M., Masumura, T., Nishizawa, N.K., Kondo, M. and Sreenivasulu, N.*: Laser microdissection-based tissue specific transcriptome analyses reveals novel regulatory network of genes involved in heat-induced grain chalk in rice endosperm. Plant and Cell Physiology, 60: 626-642 (2019)

<<2018年>>

118. Takahashi, H.*, Qi, X., Shimamura, S.*, Yanagawa, A., Hiraga, S. and Nakazono, M.: Sucrose supply from leaves is required for aerenchymatous phellem formation in hypocotyl of soybean under waterlogged conditions. Annals of Botany, 121: 723-731 (2018)

117. Yamauchi, T., Colmer, T.D., Pedersen, O. and Nakazono, M.*: Regulation of root traits for internal aeration and tolerance to soil waterlogging-flooding stress. Plant Physiology, 176: 1118-1130 (2018)

<<2017年>>

116. Yamauchi, T., Fukazawa, A. and Nakazono, M.*: METALLOTHIONEIN genes encoding ROS scavenging enzymes are down-regulated in the root cortex during inducible aerenchyma formation in rice. Plant Signaling & Behavior, 12: e1388976 (2017)

115. Yamauchi, T., Yoshioka, M., Fukazawa, A., Mori, H., Nishizawa, N.K., Tsutsumi, N., Yoshioka, H. and Nakazono, M.*: An NADPH oxidase RBOH functions in rice roots during lysigenous aerenchyma formation under oxygen-deficient conditions. Plant Cell, 29: 775-790 (2017)

114. Kotula, L.*, Schreiber, L., Colmer, T.D. and Nakazono, M.: Anatomical and biochemical characterisation of a barrier to radial O2 loss in adventitious roots of two contrasting Hordeum marinum accessions. Functional Plant Biology, 44: 845-857 (2017)

113. Sasidharan, R., Bailey-Serres, J., Ashikari, M., Atwell, B., Colmer, T.D., Fagerstedt, K., Fukao, T., Geigenberger, P., Hebelstrup, K., Hill, R.D., Holdsworth, M.J., Ismail, A.M., Licausi, F., Mustroph, A., Nakazono, M., Pedersen, O., Perata, P., Sauter, M., Shih, M.-C., Sorrell, B., Striker, G.G., van Dongen, J.T., Whelan, J., Xiao, S., Visser, E.J.W. and Voesenek, L.A.C.J.: Community recommendations on terminology and procedures used in flooding and low oxygen stress research. New Phytologist, 214: 1403-1407 (2017)

112. Ishikawa, N., Takahashi, H., Nakazono, M. and Tsukaya, H.*: Molecular bases for phyllomorph development in a one-leaf plant, Monophyllaea glabra (Gesneriaceae). American Journal of Botany, 104: 233-240 (2017)

111. Watanabe, K., Takahashi, H., Sato, S., Nishiuchi, S., Omori, F., Malik, A.I., Colmer, T.D., Mano, Y.* and Nakazono, M.*: A major locus involved in the formation of the radial oxygen loss barrier in adventitious roots of teosinte Zea nicaraguensis is located on the short-arm of chromosome 3. Plant, Cell & Environment, 40: 304-316 (2017)

<<2016年>>

110. Mohanty, B., Takahashi, H., de los Reyes, B.G., Wijaya, E., Nakazono, M. and Lee, D.Y.*: Transcriptional regulatory mechanism of alcohol dehydrogenase 1-deficient mutant of rice for the cell survival under complete submergence. Rice, 9: 51 (2016)

109. Yamauchi, T.*, Tanaka, A., Mori, H., Takamure, I., Kato, K. and Nakazono, M.*: Ethylene-dependent aerenchyma formation in adventitious roots is regulated differently in rice and maize. Plant, Cell & Environment, 39: 2145-2157 (2016)　

108. Matsuda, S.*, Takano, S., Nagasawa. H., Yoshikawa, S., Tokuji, Y., Yazaki, K., Nakazono, M., Takamure, I. and Kato, K.*: Rice stomatal closure requires guard cell plasma membrane ATP-binding cassette transporter RCN1/OsABCG5. Molecular Plant, 9: 417-427 (2016)

<<2015年>>

107.Ishimaru, T. Ida, M., Hirose, S., Shimamura, S., Masumura, T., Nishizawa, N.K., Nakazono, M. and Kondo, M.*: Laser microdissection-based gene expression analysis in the aleurone layer and starchy endosperm of developing rice caryopses in the early storage phase. Rice, 8: 22 (2015).

106.Yamauchi, T., Shiono, K., Nagano, M., Fukazawa, A., Ando, M., Takamure, I., Mori, H., Nishizawa, N.K., Kawai-Yamada, M., Tsutsumi, N., Kato, K. and Nakazono, M.*: Ethylene biosynthesis is promoted by very-long-chain fatty acids during lysigenous aerenchyma formation in rice roots. Plant Physiology, 169: 180-193 (2015).

105.Hanada, T., Nashima, K., Kato, M., Takashina, T., Ikeda, K., Sakamoto, Y., Takahashi, H., Nakazono, M., Oikawa, A., Shiratake, K. and Isuzugawa, K.*: Molecular cloning and expression analysis of the WEE1 and CCS52A in European pear (Pyrus communis L.) and their possible roles in a giant fruit mutant. Journal of Horticultural Science & Biotechnology, 90: 511-517 (2015).

104.Takano, S., Matsuda, S., Funabiki, A., Furukawa, J., Yamauchi, T., Tokuji, Y., Nakazono, M., Shinohara, Y., Takamure, I. and Kato, K.*: The rice RCN11 gene encodes β1,2-xylosyltransferase and is required for plant responses to abiotic stresses and phytohormones. Plant Science, 236: 75-88 (2015).

103.Takahashi, H., Yamauchi, T., Rajhi, I., Nishizawa, N.K. and Nakazono, M.*: Transcript profiles in cortical cells of maize primary root during ethylene-induced lysigenous aerenchyma formation under aerobic conditions. Annals of Botany, 115: 879-894 (2015).

102. Matsuda, T., Matsushima, M., Nabemoto, M., Osaka, M., Sakazono, S., Masuko-Suzuki, H., Takahashi, H., Nakazono, M., Iwano, M., Takayama, S., Shimizu, K.K., Okumura, K., Suzuki, G., Watanabe, M. and Suwabe, K.*: Transcriptional characteristics and differences in Arabidopsis stigmatic papilla cells pre- and post-pollination. Plant and Cell Physiology, 56: 663-673 (2015).

101.Toyomasu, T.*, Usui, M., Sugawara, C., Kanno, Y., Sakai, A., Takahashi, H., Nakazono, M., Kuroda, M., Miyamoto, K., Morimoto, Y., Mitsuhashi W., Okada, K., Yamaguchi, S. and Yamane, H.: Transcripts of two ent-copalyl diphosphate synthase genes differentially localize in rice plants according to their distinct biological roles. Journal of Experimental Botany, 66: 369-376 (2015)

<<2014年>>

100. Shiono, K.*, Ando, M., Nishiuchi, S., Takahashi, H., Watanabe, K., Nakamura, M., Matsuo, Y., Yasuno, N., Yamanouchi, U., Fujimoto, M., Takanashi, H., Ranathunge, K., Franke, R., Shitan, N., Nishizawa, N.K., Takamure, I., Yano, M., Tsutsumi, N., Schreiber, L., Yazaki, K., Nakazono, M.* and Kato, K.*: RCN1/OsABCG5, an ATP-binding cassette (ABC) transporter, is required for hypodermal suberization of roots in rice (Oryza sativa). Plant Journal, 80: 40-51 (2014)

99. Shiono, K.*, Yamauchi, T, Yamazaki, S., Mohanty, B., Malik, A.I., Nagamura, Y., Nishizawa, N.K., Tsutsumi, N., Colmer, T.D. and Nakazono, M.*: Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of Experimental Botany, 65: 4795-4806 (2014)

98. Yamauchi, T.*, Abe, F., Kawaguchi, K., Oyanagi, A. and Nakazono, M.: Adventitious roots of wheat seedlings that emerge in oxygen-deficient conditions have increased root diameters with highly developed lysigenous aerenchyma. Plant Signaling & Behavior, 9: e28506 (2014)

97. Kulichikhin, K.*, Yamauchi, T., Watanabe, K. and Nakazono, M.*: Biochemical and molecular characterization of rice (Oryza sativa L.) roots forming a barrier to radial oxygen loss. Plant, Cell & Environment, 37: 2406-2420 (2014)

96. Nashima, K., Terakami, S., Nishitani, C., Yamamoto, T., Habu, T., Takahashi, H., Nakazono, M., Isuzugawa, K., Hanada, T., Takashina, T., Matsumoto, S., Otagaki, S., Mori, H., Oikawa, A. and Shiratake, K.*: Transcriptome analysis of flower receptacle of the European pear (Pyrus communis L.) 'La France' and its giant fruit sport using next-generation sequencing technology. Journal of Horticultural Science & Biotechnology, 89: 293-300 (2014)

95. Takahashi, H.*, Greenway, H., Matsumura, H., Tsutsumi N. and Nakazono, M.: Rice alcohol dehydrogenase 1 promotes survival and has a major impact on carbohydrate metabolism in the embryo and endosperm when seeds are germinated in partially oxygenated water. Annals of Botany, 113: 851-859 (2014)

94. Ogo, Y., Kakei, Y., Nakanishi-Itai, R., Kobayashi, T., Nakanishi, H., Takahashi, H., Nakazono, M and Nishizawa, N.K.*: Spatial transcriptomes of iron-deficient and cadmium-stressed rice. New Phytologist, 201: 781-794 (2014).

93. Hu, Z., Yamauchi, T., Yang, J., Jikumaru, Y., Tsuchida-Mayama, T., Ichikawa, H., Takamure, I., Nagamura, Y., Tsutsumi, N., Yamaguchi, S., Kyozuka J. and Nakazono M.*: Strigolactone and cytokinin act antagonistically in regulating rice mesocotyl elongation in darkness. Plant and Cell Physiology, 55: 30-41 (2014)

92. Yamauchi, T.*, Watanabe, K., Fukazawa, A., Mori, H., Abe, F., Kawaguchi, K., Oyanagi, A. and Nakazono, M.: Ethylene and reactive oxygen species are involved in root aerenchyma formation and adaptation of wheat seedlings to oxygen-deficient conditions. Journal of Experimental Botany, 65: 261-273 (2014)

91. Kotula, L.*, Colmer, T.D. and Nakazono, M.: Effects of organic acids on formation of the barrier to radial oxygen loss in roots of Hordeum marinum. Functional Plant Biology, 41: 187-202 (2014)

<<2013年>>

90. Osaka, M., Matsuda, T., Sakazono, S., Masuko-Suzuki, H., Maeda, S., Sewaki, M., Sone, M., Takahashi, H., Nakazono, M., Iwano, M., Takayama, S., Shimizu, K.K.., Yano, K., Lim, Y.P., Suzuki, G., Suwabe, K.* and Watanabe, M.*: Cell type-specific transcriptome of Brassicaceae stigmatic papilla cells from a combination of laser microdissection and RNA sequencing. Plant and Cell Physiology 54: 1894-1906 (2013)

89. Nashima, K., Shimizu, T., Nishitani, C., Yamamoto, T., Takahashi, H., Nakazono, M., Itai, A., Isuzugawa, K., Hanada, T., Takashina, T., Matsumoto, S., Otagaki, S., Oikawa, A. and Shiratake, K.*: Microarray analysis of gene expression patterns during fruit development in European pear (Pyrus communis). Scientia Horticulturae, 164: 466-473 (2013)

88. Nashima, K., Takahashi, H., Nakazono, M., Shimizu, T., Nishitani, C., Yamamoto, T., Itai, A., Isuzugawa, K., Hanada, T., Takashina, T., Kato, M., Matsumoto, S., Oikawa, A. and Shiratake, K.*: Transcriptome analysis of giant pear fruit with fruit-specific DNA reduplication on a mutant branch. Journal of the Japanese Society for Horticultural Science, 82: 301-311 (2013)

87. Watanabe, K., Nishiuchi, S., Kulichikhin, K. and Nakazono M.*: Does suberin accumulation in plant roots contribute to waterlogging tolerance? Frontiers in Plant Science, 4: 178 (2013)

86. Xiong, H., Kakei, Y., Kobayashi, T., Guo, X., Nakazono, M., Takahashi, H., Nakanishi, H., Shen, H., Zhang, F., Nishizawa, N.K.* and Zuo, Y.*: Molecular evidence for phytosiderophore-induced improvement of iron nutrition of peanut intercropped with maize in calcareous soil. Plant, Cell & Environment, 36: 1888-1902 (2013)

85. Yamauchi, T., Shimamura, S., Nakazono, M. and Mochizuki, T.*: Aerenchyma formation in crop species: a review. Field Crops Research, 152: 8-16 (2013)

84. Kubo, T., Fujita, M., Takahashi, H., Nakazono, M., Tsutsumi, N. and Kurata, N.*: Transcriptome analysis of developing ovules in rice isolated by laser microdissection. Plant and Cell Physiology, 54: 750-765 (2013)

<<2012年>>

83. Abiko, T., Obara, M., Abe, F., Kawaguchi, K., Oyanagi, A., Yamauchi, T. and Nakazono, M.*: Screening of candidate genes associated with constitutive aerenchyma formation in adventitious roots of the teosinte Zea nicaraguensis. Plant Root, 6: 19-27 (2012)

82. Xiong, H., Kobayashi, T., Kakei, Y., Senoura, T., Nakazono, M., Takahashi, H., Nakanishi, H., Shen, H., Duan, P., Guo, X., Nishizawa, N.K.* and Zuo, Y.*: AhNRAMP1 iron transporter is involved in iron acquisition in peanut. Journal of Experimental Botany, 63: 4437-4446 (2012)

81. Abiko, T., Kotula, L., Shiono, K., Malik, A.I., Colmer, T.D. and Nakazono, M.*: Enhanced formation of aerenchyma and induction of a barrier to radial oxygen loss in adventitious roots of Zea nicaraguensis contribute to its waterlogging tolerance as compared with maize (Zea mays ssp. mays). Plant, Cell & Environment, 35: 1618-1630 (2012)

80. Takanashi, K., Takahashi, H., Sakurai, N., Sugiyama, A., Shibata, D., Nakazono, M. and Yazaki, K.*: Cell-type specific transcriptome analysis in nodules of Lotus japonicas. Molecular Plant-Microbe Interactions, 25: 869-876 (2012)

79. Fujii, M., Yokosho, K., Yamaji, N., Saisho, D., Yamane, M., Takahashi, H., Sato, K., Nakazono, M. and Ma, J.F.*: Acquisition of aluminum tolerance by modification of a single gene in barley. Nature Communications, 3 : 713 (2012)

78. Nishiuchi, S., Yamauchi, T., Takahashi, H., Kotula, L. and Nakazono, M.*: Mechanisms for coping with submergence and waterlogging in rice. Rice, 5: 2 (2012)

77. Takehisa, H., Sato, Y.*, Igarashi, M., Abiko, T., Antonio, B., Kamatsuki, K., Minami, H., Namiki, N., Inukai, Y., Nakazono, M. and Nagamura, Y.: Genome-wide transcriptome dissection of the rice root system: Implications for developmental and physiological functions. Plant Journal, 69: 126-140 (2012)

<<2011年>>

76. Aya, K., Suzuki, G., Suwabe, K., Hobo, T., Takahashi, H., Shiono, K., Yano, K., Tsutsumi, N., Nakazono, M., Nagamura, Y., Matsuoka, M.* and Watanabe, M.*: Comprehensive network analysis of anther-expressed genes in rice by the combination of 33 laser microdissection and 143 spatiotemporal microarrays. PLOS ONE, 6: e26162 (2011)

75. Takahashi, H., Saika, H., Matsumura, H., Nagamura, Y., Tsutsumi, N., Nishizawa, N.K. and Nakazono, M.*: Cell division and cell elongation in the coleoptile of rice alcohol dehydrogenase 1-deficient mutant are reduced under complete submergence. Annals of Botany, 108: 253-261 (2011)

74. Rajhi, I., Yamauchi, T., Takahashi, H., Nishiuchi, S., Shiono, K., Watanabe, R., Mliki, A., Nagamura, Y., Tsutsumi, N., Nishizawa, N.K. and Nakazono, M.*: Identification of genes expressed in maize root cortical cells during lysigenous aerenchyma formation using laser microdissection and microarray analyses. New Phytologist, 190: 351-368 (2011)

73. Shiono, K.*, Ogawa, S., Yamazaki, S., Isoda, H., Fujimura, T., Nakazono, M. and Colmer, T.D.: Contrasting dynamics of radial O2-loss barrier induction and aerenchyma formation in rice roots of two lengths. Annals of Botany, 107: 89-99 (2011)

<<2010年>>

72. Miyazawa, H., Oka-Kira, E., Sato, N., Takahashi, H., Wu, G. J., Sato, S., Hayashi, M., Betsuyaku, S., Nakazono, M., Tabata, S., Harada, K., Sawa, S., Fukuda, H. and Kawaguchi, M.*: A receptor-like kinase, KLAVIER, mediates systemic regulation of nodulation and non-symbiotic shoot development in Lotus japonicus. Development, 137: 4317-4325 (2010)

71. Wakamatsu, K., Fujimoto, M., Nakazono, M., Arimura, S. and Tsutsumi, N.*: Fusion of mitochondria in tobacco suspension cultured cells is dependent on the cellular ATP level but not on actin polymerization. Plant Cell Reports, 29:1139-1145 (2010)

70. Kanehira, A., Yamada, K., Iwaya, T., Tsuwamoto, R., Kasai, A., Nakazono, M. and Harada, T.*: Apple phloem cells contain some mRNAs transported over long distances. Tree Genetics and Genomes, 6: 635-642 (2010)

69. Hu, Z., Yan, H., Yang, J., Yamaguchi, S., Maekawa, M., Takamure, I., Tsutsumi, N., Kyozuka, J. and Nakazono, M.*: Strigolactones negatively regulate mesocotyl elongation in rice during germination and growth in darkness. Plant and Cell Physiology, 51: 1136-1142 (2010)

68. Takahashi, H., Kamakura, H., Sato, Y., Shiono, K., Abiko, T., Tsutsumi, N., Nagamura, Y., Nishizawa, N.K. and Nakazono, M.*: A method for obtaining high quality RNA from paraffin sections of plant tissues by laser microdissection. Journal of Plant Research, 123: 807-813 (2010)

<<2009年>>

67. Ishimaru, T., Horigane, A.K., Ida, M., Iwasawa, N., San-oh, Y.A., Nakazono, M., Nishizawa, N.K., Masumura, T., Kondo, M. and Yoshida, M.*: Formation of grain chalkiness and changes in water distribution in developing rice caryopses grown under high-temperature stress. Journal of Cereal Science,　50: 166-174 (2009)

66. Fujimoto, M., Arimura, S., Mano, S., Kondo, M., Saito, C., Ueda, T., Nakazono, M., Nakano, A., Nishimura, M. and Tsutsumi, T.*: Arabidopsis dynamin-related proteins DRP3A and DRP3B are functionally redundant in mitochondrial fission but have distinct roles in peroxisomal fission. Plant Journal, 58: 388-400 (2009)

65. Okamoto, S., Ohnishi, E., Sato, S., Takahashi, H., Nakazono, M., Tabata, S. and Kawaguchi, M.*: Nod factor/nitrate-induced CLE genes that drive HAR1-mediated systemic regulation of nodulation. Plant and Cell Physiology, 50: 67-77 (2009)

64. Inoue, H., Kobayashi, T., Nozoye, T., Takahashi, M., Kakei, Y., Suzuki, K., Nakazono, M., Nakanishi, H., Mori, S. and Nishizawa, N.K.*: Rice OsYSL15 is an iron-regulated iron(III)-deoxymugineic acid transporter expressed in the roots and is essential for iron uptake in early growth of the seedlings. Journal of Biological Chemistry, 284: 3470-3479 (2009)

<<2008年>>

63. Hobo, T., Suwabe, K., Aya, K., Suzuki, G., Yano, K., Ishimizu, T., Fujita, M., Kikuchi, S., Hamada, K., Miyano, M., Fujioka, T., Kaneko, F., Kazama, T., Mizuta, Y., Takahashi, H., Shiono, K., Nakazono, M., Tsutsumi, N., Nagamura, Y., Kurata, N., Watanabe, M.* and Matsuoka, M.*: Various spatiotemporal expression profiles of anther-expressed genes in rice. Plant and Cell Physiology, 49: 1417-1428 (2008)

62. Suwabe, K., Suzuki, G., Takahashi, H., Shiono, K., Endo, M., Yano, K., Fujita, M., Masuko, H., Saito, H., Fujioka, T., Kaneko, F., Kazama, T., Mizuta, Y., Kawagishi-Kobayashi, M., Tsutsumi, N., Kurata, N., Nakazono, M. and Watanabe, M.*: Separated transcriptomes of male gametophyte and tapetum in rice: validity of a laser microdissection (LM) microarray. Plant and Cell Physiology, 49: 1407-1416 (2008)

61. Fujimoto, M., Arimura, S., Nakazono, M. and Tsutsumi, N.*: Arabidopsis dynamin-related protein DRP2B is co-localized with DRP1A on the leading edge of the forming cell plate. Plant Cell Reports, 27: 1581-1586 (2008)

60. Endo, A., Sawada, Y., Takahashi, H., Okamoto, M., Ikegami, K., Koiwai, H., Seo, M., Toyomasu, T., Mitsuhashi, W., Shinozaki, K., Nakazono, M., Kamiya, Y., Koshiba, T. and Nambara, E.*: Drought induction of Arabidopsis 9-cis-epoxycarotenoid dioxygenase occurs in vascular parenchyma cells. Plant Physiology, 147: 1984-1993 (2008)

59. Arimura, S.*, Fujimoto, M., Doniwa, Y., Kadoya, N., Nakazono, M., Sakamoto, W. and Tsutsumi, N.: Arabidopsis ELM1 is required for the localization of dynamin-related protein DRP3A to mitochondrial fission sites. Plant Cell, 20: 1555-1566 (2008)

58. Shiono, K., Takahashi, H., Colmer, T.D. and Nakazono, M.*: Role of ethylene in acclimations to promote oxygen transport in roots of plants in waterlogged soils. Plant Science (Ethylene Special Issue; Invited review), 175: 52-58 (2008)

<<2007年>>

57. Yan, H., Saika, H., Maekawa, M., Takamure, I., Tsutsumi, N., Kyozuka, J. and Nakazono, M.*: Rice tillering dwarf mutant dwarf3 has increased leaf longevity during darkness-induced senescence or hydrogen peroxide-induced cell death. Genes & Genetic Systems, 82: 361-366 (2007)

56. Ishimaru, T.*, Nakazono, M., Masumura, T., Abiko, M., San-oh, Y., Nishizawa, N. K. and Kondo, M.: A method for obtaining high integrity RNA from developing aleurone cells and starchy endosperm in rice (Oryza sativa L.) by laser microdissection. Plant Science, 173: 321-326 (2007)

55. Saika, H., Okamoto, M., Miyoshi, K., Kushiro, T., Shinoda, S., Jikumaru, Y., Fujimoto, M., Arikawa, T., Takahashi, H., Ando, M., Arimura, S., Miyao, A., Hirochika, H., Kamiya, Y., Tsutsumi, N., Nambara, E. and Nakazono, M.*: Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8´-hydroxylase in rice. Plant and Cell Physiology, 48: 287-298 (2007)

54. Ohtsu, K., Takahashi, H., Schnable, P.S. and Nakazono, M.*: Cell type-specific gene expression profiling in plants by using a combination of laser microdissection and high-throughput technologies. Plant and Cell Physiology, 48: 3-7 (2007)

<<2006年>>

53. Meguro, N., Tsuji, H., Suzuki, Y., Tsutsumi, N., Hirai, A. and Nakazono, M.*: Analysis of expression of genes for mitochondrial aldehyde dehydrogenase in maize during submergence and following re-aeration. Breeding Science, 56: 365-370 (2006)

52. Tsuji, H., Saika, H., Tsutsumi, N., Hirai, A. and Nakazono, M.*: Dynamic and reversible changes in histone H3-Lys4 methylation and H3 acetylation occurring at submergence-inducible genes in rice. Plant and Cell Physiology, 47: 995-1003 (2006)

51. Tsuji, H., Aya, K., Ueguchi-Tanaka, M., Shimada, Y., Nakazono, M., Watanabe, R., Nishizawa, N.K., Gomi, K., Shimada, A., Kitano, H., Ashikari, M. and Matsuoka, M.*: GAMYB controls different sets of genes and is differentially regulated by microRNA in aleurone cells and anthers. Plant Journal, 47: 427-444 (2006)

50. Saika, H., Matsumura, H., Takano, T., Tsutsumi, N. and Nakazono, M.*: A point mutation of Adh1 gene is involved in repression of coleoptile elongation under submergence in rice. Breeding Science, 56: 69-74 (2006)

49. Ishimaru, Y., Suzuki, M., Tsukamoto, T., Suzuki, K., Nakazono, M., Kobayashi, T., Wada, Y., Watanabe, S., Matsuhashi, S., Takahashi, M., Nakanishi, H., Mori, S. and Nishizawa, N.K.*: Rice plants take up iron as an Fe3+-phytosiderophore and as Fe2+. Plant Journal, 45: 335-346 (2006)

48. Nakada, M., Komatsu, M., Ochiai, T., Ohtsu, K., Nakazono, M., Nishizawa, N.K., Nitta, K., Nishiyama, R., Kameya, T. and Kanno, A.*: Isolation of MaDEF from Muscari armeniacum and analysis of its expression using laser microdissection. Plant Science, 170: 143-150 (2006)

<<2005年>>

47. Ohtsu, K.*, Hirano, H., Tsutsumi, N., Hirai, A. and Nakazono, M.: Anaconda, a new class of transposon belonging to the Mu superfamily, has diversified by acquiring host genes during rice evolution. Molecular Genetics and Genomics, 274: 606-615 (2005)

46. Saika, H., Nakazono, M., Ikeda, A., Yamaguchi, J., Masaki, S., Kanekatsu, M. and Nemoto, K.*: A transposon-induced spontaneous mutation results in low β-amylase content in rice. Plant Science, 169: 239-244 (2005)

45. Yoshida, K.T.*, Endo, M., Nakazono, M., Fukuda, H., Demura, T., Tsuchiya, T. and Watanabe, M.:　cDNA microarray analysis of gene expression changes during pollination, pollen-tube elongation, fertilization, and early embryogenesis in rice pistils. Sexual Plant Reproduction, 17: 269-275 (2005)

<<2004年>>

44. Fujimoto, M., Arimura, S., Nakazono, M. and Tsutsumi, N.*: A rice dynamin-like protein, OsDRP3A, is involved in mitochondrial fission. Breeding Science, 54: 367-372 (2004)

43. Arimura, S., Yamamoto, J., Aida, G.P., Nakazono, M. and Tsutsumi, N.*: Frequent fusion and fission of plant mitochondria with unequal nucleoid distribution. Proceedings of the National Academy of Sciences of the United States of America, 101: 7805-7808 (2004)

42. Arimura, S.*, Aida, G.P., Fujimoto, M., Nakazono, M. and Tsutsumi, N.: Arabidopsis dynamin-like protein 2a (ADL2a), like ADL2b, is involved in plant mitochondrial division. Plant and Cell Physiology, 45: 236-242 (2004)

41. Li, Y., Ohtsu, K., Nemoto, K., Tsutsumi, N., Hirai, A. and Nakazono, M.*: The rice pyruvate decarboxylase 3 gene, which lacks introns, is transcribed in mature pollen. Journal of Experimental Botany, 55: 145-146 (2004)

40. Schnable, P.S.*, Hochholdinger, F. and Nakazono, M.: Global expression profiling applied to plant development. Current Opinion in Plant Biology, 7: 50-56 (2004)

<<2003年>>

39. Tsuji, H., Meguro, N., Suzuki, Y., Tsutsumi, N., Hirai, A. and Nakazono, M.*: Induction of mitochondrial aldehyde dehydrogenase by submergence facilitates oxidation of acetaldehyde during re-aeration in rice. FEBS Letters, 546: 369-373 (2003)

38. Nakazono, M., Qiu, F., Borsuk, L.A. and Schnable, P.S.*: Laser capture microdissection, a tool for the global analysis of gene expression in specific plant cell types: Identification of genes differentially expressed in epidermal cells or vascular tissues of maize. Plant Cell, 15: 583-596 (2003)

37. Tsuji, H., Tsutsumi, N., Sasaki, T., Hirai, A. and Nakazono, M.*: Organ-specific expressions and chromosomal locations of two mitochondrial aldehyde dehydrogenase genes from rice (Oryza sativa L.), ALDH2a and ALDH2b. Gene, 305: 195-204 (2003)

<<2002年>>

36. Notsu, Y., Masood, S., Nishikawa, T., Kubo, N., Akiduki, G., Nakazono, M., Hirai, A. and Kadowaki, K.*: The complete sequence of rice (Oryza sativa L.) mitochondrial genome: frequent DNA sequence acquisition and loss during evolution of flowering plants. Molecular Genetics and Genomics, 268: 434-445 (2002)

35. Ohtsu, K., Ito, Y., Saika, H., Nakazono, M.*, Tsutsumi, N. and Hirai, A.: ABA-independent expression of rice alternative oxidase genes under environmental stresses. Plant Biotechnology, 19: 187-190 (2002)

34. Saika, H., Ohtsu, K., Hamanaka, S., Nakazono, M.*, Tsutsumi, N. and Hirai, A.: AOX1c, a novel rice gene for alternative oxidase; comparison with rice AOX1a and AOX1b. Genes & Genetic Systems, 77: 31-38 (2002)

<<2001年>>

33. Meguro, N., Nakazono, M.*, Tsutsumi, N. and Hirai, A.: Decreased transcription of a gene encoding putative mitochondrial aldehyde dehydrogenase in barley (Hordeum vulgare L.) under submerged conditions. Plant Biotechnology, 18: 223-228 (2001)

32. Saisho, D., Nakazono, M.*, Lee, K.H., Tsutsumi, N., Akita, S. and Hirai, A.: The gene for alternative oxidase-2 (AOX2) from Arabidopsis thaliana consists of five exons unlike other AOX genes and is transcribed at an early stage during germination. Genes & Genetic Systems, 76: 89-97 (2001)

31. Ohtsu, K., Nakazono, M., Tsutsumi, N. and Hirai, A.*: Characterization and expression of the genes for cytochrome c oxidase subunit VIb (COX6b) from rice and Arabidopsis thaliana. Gene, 264: 233-239 (2001)

30. Saisho, D., Nakazono, M.*, Tsutsumi, N. and Hirai, A.: ATP synthesis inhibitors as well as respiratory inhibitors increase steady-state level of alternative oxidase mRNA in Arabidopsis thaliana. Journal of Plant Physiology, 158: 241-245 (2001)

<<2000年>>

29. Nakazono, M.*, Tsuji, H., Li, Y., Saisho, D., Arimura, S., Tsutsumi, N. and Hirai, A.: Expression of a gene encoding mitochondrial aldehyde dehydrogenase in rice increases under submerged conditions. Plant Physiology, 124: 587-598 (2000)

28. Tsuji, H., Nakazono, M.*, Saisho, D., Tsutsumi, N. and Hirai, A.: Transcript levels of the nuclear-encoded respiratory genes in rice decrease by oxygen deprivation: evidence for involvement of calcium in expression of the alternative oxidase 1a gene. FEBS Letters, 471: 201-204 (2000)

27. Li, Y., Nakazono, M.*, Tsutsumi, N. and Hirai, A.: Molecular and cellular characterizations of a cDNA clone encoding a novel isozyme of aldehyde dehydrogenase from rice. Gene, 249: 67-74 (2000)

26. Nakazono, M., Imamura, T., Tsutsumi, N., Sasaki, T. and Hirai, A.*: Characterization of two cDNA clones encoding isozymes of the F1F0-ATPase inhibitor protein of rice mitochondria. Planta, 210: 188-194 (2000)

<<1999年>>

25. Watanabe, A., Nakazono, M., Tsutsumi, N. and Hirai, A.*: AtUCP2: a Novel isoform of the mitochondrial uncoupling protein of Arabidopsis thaliana. Plant and Cell Physiology, 40: 1160-1166 (1999)

24. Hamanaka, S., Ohtsu, K., Kadowaki, K., Nakazono, M. and Hirai, A.*: Identification of cDNA encoding cytochrome c oxidase subunit 5c (COX5c) from rice: comparison of its expression with nuclear-encoded and mitochondrial-encoded COX genes. Genes & Genetic Systems, 74: 71-75 (1999)

23. Ohtsu, K., Hamanaka, S., Yamazaki, K., Nakazono, M.* and Hirai, A.: Characterization of a cDNA encoding a novel subunit for cytochrome c oxidase (COX6b) from rice. Breeding Science, 49: 211-215 (1999)

22. Arimura, S., Takusagawa, S., Hatano, S., Nakazono, M., Hirai, A. and Tsutsumi, N.*: A novel plant nuclear gene coding for chloroplast ribosomal protein S9 has a transit peptide related to that of rice chloroplast ribosomal protein L12. FEBS Letters, 450: 231-234 (1999)

<<1998年>>

21. Miyata, S., Nakazono, M. and Hirai, A.*: Transcription of plastid-derived tRNA genes in rice mitochondria. Current Genetics, 34: 216-220 (1998)

<<1997年>>

20. Nakazono, M. and Yoshida, K.T.: A rapid and efficient method for the isolation of differentially expressed genes: Simplified differential display. Plant Biotechnology, 14: 187-190 (1997)

19. Ito, Y., Saisho, D., Nakazono, M.*, Tsutsumi, N. and Hirai, A.: Transcript levels of tandem-arranged alternative oxidase genes in rice are increased by low temperature. Gene, 203: 121-129 (1997)

18. Kanno, A.*, Nakazono, M., Hirai, A. and Kameya, T.: Maintenance of chloroplast-derived sequences in the mitochondrial DNA of Gramineae. Current Genetics, 32: 413-419 (1997)

17. Saisho, D., Nambara, E., Naito, S., Tsutsumi, N., Hirai, A. and Nakazono, M.*: Characterization of the gene family for alternative oxidase from Arabidopsis thaliana. Plant Molecular Biology, 35: 585-596 (1997)

16. Kanno, A.*, Nakazono, M., Hirai, A. and Kameya, T.: A chloroplast derived trnH gene is expressed in the mitochondrial genome of gramineous plants. Plant Molecular Biology, 34: 353-356 (1997)

<<1996年>>

15. Nakazono, M., Nishiwaki, S., Tsutsumi, N. and Hirai, A.*: A chloroplast-derived sequence is utilized as a source of promoter sequences for the gene for subunit 9 of NADH dehydrogenase (nad9) in rice mitochondria. Molecular and General Genetics, 252: 371-378 (1996)

14. Ito, Y., Nakazono, M., Kadowaki, K., Tsutsumi, N. and Hirai, A.*: RNA editing of transcripts of the gene for apocytochrome b (cob) in rice mitochondria. Genes & Genetic Systems, 71: 85-89 (1996)

13. Nakazono, M., Ito, Y., Tsutsumi, N. and Hirai, A.*: The gene for a subunit of an ABC-type heme transporter is transcribed together with the gene for subunit 6 of NADH dehydrogenase in rice mitochondria. Current Genetics, 29: 412-416 (1996)

12. Nakazono, M., Ishikawa, M., Yoshida, K.T., Tsutsumi, N. and Hirai, A.*: Multiple initiation sites for transcription of a gene for subunit 1 of F1-ATPase (atp1) in rice mitochondria. Current Genetics, 29: 417-422 (1996)

<<1995年>>

11. Nakazono, M., Kanno, A., Tsutsumi, N. and Hirai, A.*: Homologous recombination mediated by two palindromic repeated sequences in the mitochondrial genome of Oryza. Theoretical and Applied Genetics, 91: 1-8 (1995)

10. Nakazono, M., Itadani, H., Wakasugi, T., Tsutsumi, N., Sugiura, M. and Hirai, A.*: The rps3-rpl16-nad3-rps12 gene cluster in rice mitochondrial DNA is transcribed from alternative promoters. Current Genetics, 27: 184-189 (1995)

 9. Nakazono, M., Tsutsumi, N. and Hirai, A.*: The CRTA motif is present in the promoters of mitochondrial genes of rice. Plant Science, 105: 227-234 (1995)

 8. Nakazono, M., Tsutsumi, N., Sugiura, M. and Hirai, A.*: A small repeated sequence contains the transcription initiation sites for both trnfM and rrn26 in rice mitochondria. Plant Molecular Biology, 28: 343-346 (1995)

 7. Nishiwaki, S., Nakazono, M., Tsutsumi, N. and Hirai, A.*: Structure of a gene for subunit 9 of NADH dehydrogenase (nad9) in rice mitochondria and RNA editing of its transcript. Plant and Cell Physiology, 36: 1135-1138 (1995)

<<1994年>>

 6. Nakazono, M., Kanno, A., Tsutsumi, N. and Hirai, A.*: Palindromic repeated sequences (PRSs) in the mitochondrial genome of rice: evidence for their insertion after divergence of the genus Oryza from the other Gramineae. Plant Molecular Biology, 24: 273-281 (1994)

 5. Watanabe, N., Nakazono, M., Kanno, A., Tsutsumi, N. and Hirai, A.*: Evolutionary variation in DNA sequences transferred from chloroplast genomes to mitochondrial genomes in the Gramineae. Current Genetics, 26: 512-518 (1994)

 4. Itadani, H., Wakasugi, T., Sugita, M., Sugiura, M.*, Nakazono, M. and Hirai, A.: Nucleotide sequence of a 28 kbp portion of rice mitochondrial DNA: the existence of many sequences that correspond to parts of mitochondrial genes in intergenic regions. Plant and Cell Physiology, 35: 1239-1244 (1994)

<<1993年>>

 3. Hirai, A.* and Nakazono, M.: Six percent of the mitochondrial genome in rice came from chloroplast DNA. Plant Molecular Biology Reporter: 11:98-100 (1993)

 2. Nakazono, M. and Hirai, A.*: Identification of the entire set of transferred chloroplast DNA sequences in the mitochondrial genome of rice. Molecular and General Genetics, 236:341-346 (1993)

<<1992年>>

 1. Iwahashi, M., Nakazono, M., Kanno, A., Sugino, K., Ishibashi, T. and Hirai, A.*: Genetic and physical maps and a clone bank of mitochondrial DNA from rice. Theoretical and Applied Genetics, 84: 275-279 (1992)

プロシーディング、総説等

37. Koembuoy, K., Nakajima, R., Otagaki, S.. Kurokura, T., Takahashi, H., Nakazono, M., Shiratake, K. and Matsumoto, S.*: Functional analyses of cultivated strawberry FT and TFL1 homologs. Acta Horticulturae 1156: 95-102 (2017)

36. Hu, Z., Qi, X., Zhang, M., Chen, X. and Nakazono, M.*: Roles of phytohormones in morphological and anatomical responses of plants to flooding stress. Plant Hormones under Challenging Environmental Factors. (Ahammed, G.J. and Yu, J. (eds)), Springer, pp. 117-132 (2016)

35. Takahashi, H. Yamauchi, T., Colmer, T.D. and Nakazono, M.*: Aerenchyma formation in plants. Plant Cell Monographs: Low-Oxygen Stress in Plants. (van Dongen, J.T. and Licausi, F. (eds)), Springer, 21:247-265 (2014)

34. 山内卓樹、西内俊策、中園幹生*：植物の通気組織形成過程におけるメタロチオネインの組織特異的な発現制御. 生化学、84: 857-862 (2012)

33. 坂上潤一、曽根千晴、中園幹生：イネの洪水被害と冠水抵抗性. 日本作物学会紀事、81: 1-9 (2012).

32. Yamauchi, T., Rajhi, I., and Nakazono, M.*: Lysigenous aerenchyma formation in maize root is confined to cortical cells by regulation of genes related to generation and scavenging of reactive oxygen species. Plant Signaling & Behavior, 6: 759-761 (2011).

31. 塩野克宏、高橋宏和、中園幹生: 過湿土壌に対する作物の応答と適応機構. 湿地環境と作物-環境と調和した作物生産をめざして- (坂上 潤一、中園 幹生、島村 聡、伊藤 治、石澤 公明(編著)）、養賢堂、 pp. 123-133 (2010)

30. 高橋宏和、中園幹生: イネ実生の嫌気応答：冠水下で伸びる謎に迫る. 発芽生物学-種子発芽の生理・生態・分子機構- （種生物学会（吉岡俊人、清和研二）編）、文一総合出版、pp. 101-104 (2009)

29. 中園幹生: 種子形成・発芽過程におけるヒストン修飾による遺伝子発現調節. 種子の科学とバイオテクノロジー　（原田久也（監修）、種子生理生化学研究会（編））、学会出版センター、pp.140-143 (2009)

28. 辻 寛之、中園幹生: 環境ストレスに応答したヒストン修飾の制御. 植物のエピジェネティクス （島本功、飯田滋、角谷徹仁（編）） 細胞工学別冊 植物細胞工学 24: 115-117 (2008)

27. 塩野克宏、高橋宏和、中園幹生: 植物は過湿土壌にどのように適応しているのか. 化学と生物, 46: 245-251 (2008)

26. Nakazono, M. and Hirai, A.: Frequent DNA transfer among mitochondrial, plastid and nuclear genomes of rice during evolution. Rice Biology in the Genomics Era (Hirai, H., Sasaki, T., Sano, Y. and Hirano, H. (eds)) Springer, The Netherlands, pp. 107-117 (2008)

25. Ohnishi, T., Nakazono, M. and Tsutsumi, N.: Abiotic stress. Rice Biology in the Genomics Era (Hirai, H., Sasaki, T., Sano, Y. and Hirano, H. (eds)) Springer, The Netherlands, pp. 337-355 (2008)

24. 中園幹生、三好健太郎、松永幸大: ヒストン修飾による植物の環境応答. 化学と生物, 45 (1): 51-57 (2007)

23. 松永幸大、栗原大輔、中園幹生: 植物のヒストン翻訳後修飾研究の幕開け. 化学と生物 44 (12): 798-799 (2006)

22. 高橋宏和、中園幹生: レーザーマイクロダイセクション法. 日本作物学会紀事 75 (4): 583-585 (2006)

21. Meguro, N., Tsuji, H., Tsutsumi, N., Nakazono, M. and Hirai, A.: Involvement of aldehyde dehydrogenase in alleviation of post-anoxic injury in rice. Abiotic stress tolerance in plants --Toward the improvement of global environment and food-- (Rai, A.K. and Takabe, T. (eds)) Springer, The Netherlands, pp.111-119 (2006)

20. 目黒直樹、最相大輔、中園幹生: 酸化ストレスとミトコンドリア機能. 二重膜オルガネラの遺伝学　（林純一、杉山康雄、坂本亘、田中寛、正木春彦 （編）） 蛋白質核酸酵素（2005年11月号増刊） 50 (14): 1879-1882 (2005)

19. Saika, H., Tsutsumi, N., Hirai, A. and Nakazono, M.: Transcript level of rice alternative oxidase-1a gene increases by treatment with sodium azide, an inhibitor of cytochrome c oxidase. Rice Genetics News Letter 19: 59-60 (2002)

18. 中園幹生、辻寛之、目黒直樹、平井篤志：イネ科植物におけるミトコンドリア型アルデヒド脱水素酵素(ALDH2)の役割 IGEシリーズ-遺伝情報のダイナミズムとその分子機構 （東北大学遺伝生態研究センター発行、津田雅孝編集） 29: 141-149 (2001)

17. Saika, H., Ohtsu, K., Nakazono, M., Tsutsumi, N. and Hirai, A.: Expression of nuclear- and mitochondrial-encoded respiratory genes in rice under environmental stresses. Rice Genetics News Letter 18: 79-81 (2001)

16. Ohtsu, K., Nakazono, M., Tsutsumi, N. and Hirai, A.: Insertion of two Tnr1-like transposable DNA elements into the first intron of OsCOX6b1 does not affect transcription of the gene. Rice Genetics Newsletter 18: 77-79 (2001)

15. Tsuji, H., Nakazono, M., Tsutsumi, N. and Hirai, A.: Alcoholic fermentation genes are regulated by Ca2+-dependent hypoxic signaling in rice. Rice Genetics News Letter 17: 94-96 (2000)

14. Meguro, M., Tsuji, H., Nakazono, M., Tsutsumi, N. and Hirai, A.: The gene for mitochondrial aldehyde dehydrogenase (ALDH2a) from rice is highly transcribed under anaerobic conditions. Rice Genetics News Letter 17: 99-101 (2000)

13. Ohtsu, K., Nakazono, M., Tsutsumi, N. and Hirai, A.: Expression of nuclear-encoded genes for cytochrome c oxidase in rice. Rice Genetics News Letter 17: 97-98 (2000)

12. Ohtsu, K., Hamanaka, S., Nakazono, M. and Hirai, A.: COX6b in rice has a long N-terminal sequence compared with those in other species. Rice Genetics News Letter 16: 126-127 (1999)

11. Saisho, D., Nakazono, M., Tsutsumi, N. and Hirai, A.: Expression of the gene encoding the alternative oxidase is induced by treatment of rice with the bleaching herbicide norflurazon. Rice Genetics News Letter 16: 123-125 (1999)

10. Nakazono, M., Saisho, D., Ito, Y., Hamanaka, S., Tsujii, T. and Hirai, A.: Gene structure and expression of alternative oxidases from Arabidopsis thaliana and Oryza sativa. Plant mitochondria: from gene to function In: I.M. Moller, P. Gardestrom, K. Glimelius, E. Glaser (eds) Backhuys Publishers, Leiden, pp509-513 (1998)

 9. Nakazono, M., Ito, Y., Saisho, D. and Hirai, A.: Transcription of alternative oxidase genes in rice is increased by low temperature. Rice Genetics News Letter 14: 136-138 (1997)

 8. Nakazono, M., Tsutsumi, N. and Hirai, A.: Structure and gene expression of the mitochondrial genome of rice. Rice Genetics III In: G.S. Khush (eds) 105-115 (1996)

 7. Kanno, A., Nakazono, M., Watanabe, N., Tsutsumi, N., Kameya, T. and Hirai, A.: Evolutionary variations in the Gramineae: rearrangements of DNA fragments transferred from chloroplast genomes to mitochondrial genomes. International Rice Research Notes 21: 27-28 (1996)

 6. Hirai, A, Imamura, T. and Nakazono, M.: Gene expression in the mitochondrial genome of rice. Proceedings of 5th International Symposium on Rice Molecular Biology 73-79 (1996)

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