Hashimoto-Sugimoto M*, Norizuki T, Segami S, Ohta Y, Suetsugu N, Ueda T, Morita MT.
(*: Corresponding author)
Amyloplasts are necessary for full gravitropism in thallus of Marchantia polymorpha Journal of Experimental Botany (2025‑08‑19) doi: 10.1093/jxb/eraf375
Yi Luo, Yuki Hata, Juri Ohtsuka, Aino Komatsu, Mikiko Kojima, Hitoshi Sakakibara, Junko Kyozuka.
MAX2‑dependent signaling regulates the transition from 2D to 3D growth by suppressing cytokinin accumulation in Physcomitrium patens. bioRxiv (preprint) (2025‑05‑15) doi: 10.1101/2025.05.15.654175
Hitoshi Sakakibara.
Five unaddressed questions about cytokinin biosynthesis. Journal of Experimental Botany 76(7) (2025‑05‑10) doi: 10.1093/jxb/erae348
Maai E, Kojima M, Takebayashi Y, Sakakibara H
Chloroplast arrangement in finger millet under low-temperature conditions.
Biochimica et biophysica acta. (2025) doi: 10.1093/plphys/kiad197.
June‑Sik Kim, Muneo Sato, Mikiko Kojima, Muchamad Imam Asrori, Yukiko Uehara‑Yamaguchi, Yumiko Takebayashi, Thi Nhung Do, Thi Yen Do, Kieu Oanh Nguyen Thi, Hitoshi Sakakibara …
Multiomics‑based assessment of the impact of airflow on diverse plant callus cultures. Scientific Data 12(1) (2025‑02‑03) doi: 10.1038/s41597-025-04518-7
Aino Komatsu, Mizuki Fujibayashi, Kazato Kumagai, Hidemasa Suzuki, Yuki Hata, Yumiko Takebayashi, Mikiko Kojima, Hitoshi Sakakibara, Junko Kyozuka.
KAI2‑dependent signaling controls vegetative reproduction in Marchantia polymorpha through activation of LOG‑mediated cytokinin synthesis. Nature Communications 16(1) Article 1263 (2025‑02‑01) doi: 10.1038/s41467-024-55728-3
2024
Dung Tien Le, Chien Van Ha, Kien Huu Nguyen, Hoa Dinh Chu, Chao Zhu, Wei Li, Yuko Watanabe, Mikiko Kojima, Yumiko Takebayashi, Hitoshi Sakakibara, Kanji Mochida, Lam‑Son Tran L.P.
Altering endogenous cytokinin content by GmCKX13 as a strategy to develop drought‑tolerant plants. Plant Stress 14:100678 (2024) doi: 10.1016/j.stress.2024.100678
Kohei Kawaguchi, Michitaka Notaguchi, Koji Okayasu, Yu Sawai, Mikiko Kojima, Yumiko Takebayashi, Hitoshi Sakakibara, Shungo Otagaki, Shogo Matsumoto, Katsuhiro Shiratake.
Plant hormone profiling of scion and rootstock incision sites and intra- and inter-family graft junctions in Nicotiana benthamiana. Plant Signaling & Behavior 19(1) (2024‑12‑31) doi: 10.1080/15592324.2024.2331358
Kota Monden, Takamasa Suzuki, Mikiko Kojima, Yumiko Takebayashi, Daisuke Sugiura, Tsuyoshi Nakagawa, Hitoshi Sakakibara, Takushi Hachiya.
Shoot nitrate status regulates Arabidopsis shoot growth and systemic transcriptional responses via shoot adenylate isopentenyltransferase 3. bioRxiv (preprint) (2024‑12‑26) doi: 10.1101/2024.12.26.630360
Takuya Uragami, Takatoshi Kiba, Mikiko Kojima, Yumiko Takebayashi, Yuzuru Tozawa, Yuki Hayashi, Toshinori Kinoshita, Hitoshi Sakakibara.
The cytokinin efflux transporter ABCC4 participates in Arabidopsis root system development. Plant Physiology 197(1) (2024‑12‑23) doi: 10.1093/plphys/kiae628
Takushi Hachiya, Nobue Makita, Liên Bach, Alain Gojon, Tsuyoshi Nakagawa, Hitoshi Sakakibara.
Genetic and transcriptomic dissection of nitrate-independent function of Arabidopsis NRT1.1/NPF6.3/CHL1 under high ammonium condition. Soil Science and Plant Nutrition (2024‑11) doi: 10.1080/00380768.2024.2330091
Hiroshi Hashizume, Hidemi Kitano, Hiroko Mizuno, Akiko Abe, Shih‑Nan Hsiao, Genki Yuasa, Satoe Tohno, Hiromasa Tanaka, Shogo Matsumoto, Hitoshi Sakakibara, Eisuke Kita, Yoji Hirosue, Masayoshi Maeshima, Masaaki Mizuno, Masaru Hori …
Direct plasma treatment of caryopses after flowering in brewer’s rice cultivar Yamadanishiki enhanced those grain qualities through “Smart Agriculture System”. Scientific Reports 14(1): 29454 (2024‑11‑27) doi: 10.1038/s41598-024-78620-y
Hashimoto-Sugimoto M*, Norizuki T, Segami S, Ohta Y, Suetsugu N, Ueda T, Morita MT.
(*: Corresponding author)
Amyloplasts are necessary for full gravitropism in thallus of Marchantia polymorpha bioRxiv (preprint) 2024.11.20.624610 doi: 10.1101/2024.11.20.624610
Adrián González Ortega‑Villaizán, Eoghan King, Manish K. Patel, Marta‑Marina Pérez‑Alonso, Sandra S. Scholz, Hitoshi Sakakibara, Takatoshi Kiba, Mikiko Kojima, Yumiko Takebayashi, Patricio Ramos …
The endophytic fungus Serendipita indica affects auxin distribution in Arabidopsis thaliana roots through alteration of auxin transport and conjugation to promote plant growth. Plant Cell & Environment 47(10): 3899‑3919 (2024‑10‑Jul) PubMeddoi: 10.1111/pce.14989
Notaguchi M†., Ichita M., Kawasoe T., Monda K., Kurotani K.I., Higaki T., Iba K., Hashimoto‑Sugimoto M†.(†: Co-Corresponding auther)
The PATROL1 function in roots contributes to the increase in shoot biomass. Planta 260(5): 105 (2024‑09‑26) PubMeddoi: 10.1007/s00425-024-04526-8
June‑Sik Kim, Muneo Sato, Mikiko Kojima, Muchamad Imam Asrori, Yukiko Uehara‑Yamaguchi, Yumiko Takebayashi, Thi Nhung Do, Thi Yen Do, Kieu Oanh Nguyen Thi, Hitoshi Sakakibara …
Multi‑omics signatures of diverse plant callus cultures. Plant Biotechnology 41(3): 309‑314 (2024‑09‑25) doi: 10.5511/plantbiotechnology.24.0719a
Hiroshi Takagi, Shogo Ito, Jae Sung Shim, Akane Kubota, Andrew K. Hempton, Nayoung Lee, Takamasa Suzuki, Chansie Yang, Christine T. Nolan, Kerry L. Bubb, Cristina M. Alexandre, Daisuke Kurihara, Yoshikatsu Sato, Yasuomi Tada, Takatoshi Kiba, Jose L. Pruneda‑Paz, Christine Queitsch, Josh T. Cuperus, Takato Imaizumi.
A florigen‑expressing subpopulation of companion cells expresses other small proteins and reveals a nitrogen‑sensitive FT repressor. bioRxiv (preprint) (2024‑08‑19) PubMeddoi: 10.1101/2024.08.17.608367
Grace A. Johnston, Hannah M. Berry, Mikiko Kojima, Hitoshi Sakakibara, Cristiana T. Argueso
CONCERTED PLANT GROWTH AND DEFENSE THROUGH TARGETED PHYTOHORMONE CROSSTALK MODIFICATION. bioRxiv (preprint) 2024.04.08.588615. doi: 10.1101/2024.04.08.588615
Yamada H, Kato N, Ichikawa M, Mannen K, Kiba T, Osakabe Y, Sakakibara H, Matsui M, Okamoto T.
DNA- and Selectable-Marker-Free Genome-Editing System Using Zygotes from Recalcitrant Maize Inbred B73.
Plant Cell Physiol. 2024 May 30;65(5):729-736. Pumbeddoi: 10.1093/pcp/pcae010. PMID: 38288629.
Hachiya, T., Makita, N., Bach, L., Gojon, A., Nakagawa, T., & Sakakibara, H.
Genetic and transcriptomic dissection of nitrate-independent function of Arabidopsis NRT1.1/NPF6.3/CHL1 under high ammonium condition.
Soil Science and Plant Nutrition. 2024 70(5–6), 326–335. doi: 10.1080/00380768.2024.2326086
Xiaosa Xu, Michael Passalacqua, Brian Rice, Edgar Demesa-Arevalo, Mikiko Kojima, Yumiko Takebayashi, Benjamin Harris, Hitoshi Sakakibara, Andrea Gallavotti, Jesse Gillis …
Large-scale single-cell profiling of stem cells uncovers redundant regulators of shoot development and yield trait variation. bioRxiv (preprint) (2024-3-6) doi: 10.1101/2024.03.04.583414.
Naoko Kitamoto, Takashi Baba, Kazuma Okada, Hitoshi Sakakibara, Yumiko Takebayashi, Mikiko Kojima, Yasunori Yoshida, Hiroomi Kanda, Hiroyuki Imanishi.
Comparative Analysis of Transcripts Differentially Expressed in Regular and Alternative Fruit‑bearing Apple (Malus × domestica Borkh.) Cultivars with Various Bioactive Gibberellic Acid Levels.
The Horticulture Journal 93(4): 353 (2024) doi: 10.2503/hortj.QH-124
Yuka Sato, Mai F. Minamikawa, Berbudi Bintang Pratama, Shohei Koyama, Mikiko Kojima, Yumiko Takebayashi, Hitoshi Sakakibara, Tomoko Igawa.
Autonomous differentiation of transgenic cells requiring no external hormone application: the endogenous gene expression and phytohormone behaviors. Frontiers in Plant Science 15:1308417 PubMeddoi: 10.3389/fpls.2024.1308417
Kenichi Yazaki, Fuku S. Kimura, Chunhua Zhang, Delphis F. Levia, Mitsuteru Akiba, Shin-Taro Saiki, Atsushi Ishida, Mikiko Kojima, Yumiko Takebayashi, Hitoshi Sakakibara, Yutaka Maruyama, Yuko Ota & Norio Sahashi
Physiological responses of seedlings to the invasion of brown root rot hyphae differ between semi-deciduous Bischofia javanica Blume and evergreen Rhaphiolepis umbellata (Thunb.) Makino. European Journal of Plant Pathology 168, 147–166.
doi: 10.1007/s10658-023-02740-w
2023
Hiroshi Hashizume, Hidemi Kitano, Hiroko Mizuno, Akiko Abe, Genki Yuasa, Satoe Tohno, Hiromasa Tanaka, Kenji Ishikawa, Shogo Matsumoto, Hitoshi Sakakibara …
Efficacy of periodic cold plasma treatment in a paddy to produce white‑core grains in brewer's rice cultivar Yamadanishiki. Free Radical Research 57(3): 161‑173 (2023年12月) PubMeddoi: 10.1080/10715762.2023.2215914
Sandra S. Scholz, Emanuel Barth, Gilles Clément, Anne Marmagne, Jutta Ludwig‑Müller, Hitoshi Sakakibara, Takatoshi Kiba, Jesús Vicente‑Carbajosa, Stephan Pollmann, Anne Krapp …
The Root‑Colonizing Endophyte *Piriformospora indica* Supports Nitrogen‑Starved *Arabidopsis thaliana* Seedlings with Nitrogen Metabolites. International Journal of Molecular Sciences 24(20): 15372 (2023年10月19日) PubMeddoi: 10.3390/ijms242015372
Mikiko Kojima, Nobue Makita, Kazuki Miyata, Mika Yoshino, Akira Iwase, Miwa Ohashi, Alicia Surjana, Toru Kudo, Noriko Takeda‑Kamiya, Kiminori Toyooka …
A cell wall–localized cytokinin/purine riboside nucleosidase is involved in apoplastic cytokinin metabolism in Oryza sativa. Proceedings of the National Academy of Sciences USA 120(36): e2217708120 (2023-08-28) PubMeddoi: 10.1073/pnas.2217708120
Kiba T, Mizutani K, Nakahara A, Takebayashi Y, Kojima M, Hobo T, Osakabe Y, Osakabe K, Sakakibara H.
The trans-zeatin-type side-chain modification of cytokinins controls rice growth.
Plant Physiology (2023) doi: 10.1093/plphys/kiad197.
Hayashi M, Mähönen AP, Sakakibara H, Torii KU, Umeda M.
Plant Stem Cells: the source of plant vitality and persistent growth.
Plant Cell Physiology (2023) doi: 10.1093/pcp/pcad009.
Yamazaki C, Yamazaki T, Kojima M, Takebayashi Y, Sakakibara H, Uheda E, Oka M, Kamada M, Shimazu T, Kasahara H, Sano H, Suzuki T, Higashibata A, Miyamoto K, Ueda J.
Comprehensive analyses of plant hormones in etiolated pea and maize seedlings grown under microgravity conditions in space: Relevance to the International Space Station experiment "Auxin Transport".
Life Sciences in Space Research (2023) doi: 10.1016/j.lssr.2022.10.005.
2022
Pérez-Alonso MM, Guerrero-Galán C, González Ortega-Villaizán A, Ortiz-García P, Scholz SS, Ramos P, Sakakibara H, Kiba T, Ludwig-Müller J, Krapp A, Oelmüller R, Vicente-Carbajosa J, Pollmann S.
The calcium sensor CBL7 is required for Serendipita indica-induced growth stimulation in Arabidopsis thaliana, controlling defense against the endophyte and K+ homoeostasis in the symbiosis.
Plant Cell Environ. (2022) doi: 10.1111/pce.14420.
Kawaguchi K, Nakaune M, Ma JF, Kojima M, Takebayashi Y, Sakakibara H, Otagaki S, Matsumoto S, Shiratake K.
Plant Hormone and Inorganic Ion Concentrations in the Xylem Exudate of Grafted Plants Depend on the Scion-Rootstock Combination.
Plants (2022) doi: 10.3390/plants11192594.
Séré D, Cassan O, Bellegarde F, Fizames C, Boucherez J, Schivre G, Azevedo J, Lagrange T, Gojon A, Martin A.
Loss of Polycomb proteins CLF and LHP1 leads to excessive RNA degradation in Arabidopsis.
J Exp Bot. (2022) doi: 10.1093/jxb/erac216.
Aubert J, Bellegarde F, Oltehua-Lopez O, Leblanc O, Arteaga-Vazquez MA, Martienssen RA, Grimanelli D.
AGO104 is a RdDM effector of paramutation at the maize b1 locus.
PLoS ONE (2022) doi: 10.1371/journal.pone.0273695.
Yang Q, Zhang J, Kojima M, Takebayashi Y, Uragami T, Kiba T, Sakakibara H, Lee Y.
ABCG11 modulates cytokinin responses in Arabidopsis thaliana.
Frontiers in Plant Science (2022) doi: 10.3389/fpls.2022.976267.
Utsumi Y, Tanaka M, Utsumi C, Takahashi S, Matsui A, Fukushima A, Kobayashi M, Sasaki R, Oikawa A, Kusano M, Saito K, Kojima M, Sakakibara H, Sojikul P, Narangajavana J, Seki M.
Integrative omics approaches revealed a crosstalk among phytohormones during tuberous root development in cassava.
Plant Molecular Biology (2022) doi: 10.1007/s11103-020-01033-8.
Tabata R, Kamiya T, Imoto S, Tamura H, Ikuta K, Tabata M, Hirayama T, Tsukagoshi H, Tanoi K, Suzuki T, Hachiya T, Sakakibara H.
Systemic Regulation of Iron Acquisition by Arabidopsis in Environments with Heterogeneous Iron Distributions.
Plant Cell Physiology (2022) doi: 10.1093/pcp/pcac049.
Kusano M, Worarad K, Fukushima A, Kamiya K, Mitani Y, Okazaki Y, Higashi Y, Nakabayashi R, Kobayashi M, Mori T, Nishizawa T, Takebayashi Y, Kojima M, Sakakibara H, Saito K, Hao S, Shinozaki Y, Okabe Y, Kimbara J, Ariizumi T, Ezura H.
Transcriptomic, Hormonomic and Metabolomic Analyses Highlighted the Common Modules Related to Photosynthesis, Sugar Metabolism and Cell Division in Parthenocarpic Tomato Fruits during Early Fruit Set.
Cells (2022) doi: 10.3390/cells11091420.
Kawai M, Tabata R, Ohashi M, Honda H, Kamiya T, Kojima M, Takebayashi Y, Oishi S, Okamoto S, Hachiya T, Sakakibara H.
Regulation of ammonium acquisition and use in Oryza longistaminata ramets under nitrogen source heterogeneity.
Plant Physiology (2022) doi: 10.1093/plphys/kiac025.
Monden K, Kojima M, Takebayashi Y, Suzuki T, Nakagawa T, Sakakibara H, Hachiya T.
Root-Specific Reduction of Cytokinin Perception Enhances Shoot Growth in Arabidopsis thaliana.
Plant Cell Physiology (2022) doi: 10.1093/pcp/pcac013.
Ishida S, Suzuki H, Iwaki A, Kawamura S, Yamaoka S, Kojima M, Takebayashi Y, Yamaguchi K, Shigenobu S, Sakakibara H, Kohchi T, Nishihama R.
Diminished Auxin Signaling Triggers Cellular Reprogramming by Inducing a Regeneration Factor in the Liverwort Marchantia polymorpha.
Plant Cell Physiology (2022) doi: 10.1093/pcp/pcac004.
Fujita T, Beier MP, Tabuchi-Kobayashi M, Hayatsu Y, Nakamura H, Umetsu-Ohashi T, Sasaki K, Ishiyama K, Murozuka E, Kojima M, Sakakibara H, Sawa Y, Miyao A, Hayakawa T, Yamaya T, Kojima S.
Cytosolic Glutamine Synthetase GS1;3 Is Involved in Rice Grain Ripening and Germination.
Frontiers in Plant Science (2022) doi: 10.3389/fpls.2022.835835.
Kawai K, Takehara S, Kashio T, Morii M, Sugihara A, Yoshimura H, Ito A, Hattori M, Toda Y, Kojima M, Takebayashi Y, Furuumi H, Nonomura KI, Mikami B, Akagi T, Sakakibara H, Kitano H, Matsuoka M, Ueguchi-Tanaka M.
Evolutionary alterations in gene expression and enzymatic activities of gibberellin 3-oxidase 1 in Oryza.
Communications Biology (2022) doi: 10.1038/s42003-022-03008-5.
2021
Hachiya T, Inaba J, Wakazaki M, Sato M, Toyooka K, Miyagi A, Kawai-Yamada M, Sugiura D, Nakagawa T, Kiba T, Gojon A, Sakakibara H.
Excessive ammonium assimilation by plastidic glutamine synthetase causes ammonium toxicity in Arabidopsis thaliana.
Nature Communications (2021) doi: 10.1038/s41467-021-25238-7.
Then C, Bellegarde F, Schivre G, Martinière A, Macia JL, Xiong TC, Drucker M.
Plant Viruses Can Alter Aphid-Triggered Calcium Elevations in Infected Leaves.
Cells (2021) doi: 10.3390/cells10123534.
Koga H, Kojima M, Takebayashi Y, Sakakibara H, Tsukaya H.
Identification of the unique molecular framework of heterophylly in the amphibious plant Callitriche palustris L.
Plant Cell (2021) doi: 10.1093/plcell/koab192.
Takahashi N, Inagaki S, Nishimura K, Sakakibara H, Antoniadi I, Karady M, Ljung K, Umeda M.
Alterations in hormonal signals spatially coordinate distinct responses to DNA double-strand breaks in Arabidopsis roots.
Science Advances (2021) doi: 10.1126/sciadv.abg0993.
Sakakibara H.
Cytokinin biosynthesis and transport for systemic nitrogen signaling.
Plant Journal (2021) doi: 10.1111/tpj.15011.
Sanagi M, Aoyama S, Kubo A, Lu Y, Sato Y, Ito S, Abe M, Mitsuda N, Ohme-Takagi M, Kiba T, Nakagami H, Rolland F, Yamaguchi J, Imaizumi T, Sato T.
Low nitrogen conditions accelerate flowering by modulating the phosphorylation state of FLOWERING BHLH 4 in Arabidopsis.
Proc Natl Acad Sci U S A. (2021) doi: 10.1073/pnas.2022942118.
Shibasaki K, Takebayashi A, Makita N, Kojima M, Takebayashi Y, Kawai M, Hachiya T, Sakakibara H.
Nitrogen Nutrition Promotes Rhizome Bud Outgrowth via Regulation of Cytokinin Biosynthesis Genes and an Oryza longistaminata Ortholog of FINE CULM 1.
Frontiers in Plant Science (2021) doi: 10.3389/fpls.2021.670101.
Winkelmüller TM, Entila F, Anver S, Piasecka A, Song B, Dahms E, Sakakibara H, Gan X, Kułak K, Sawikowska A, Krajewski P, Tsiantis M, Garrido-Oter R, Fukushima K, Schulze-Lefert P, Laurent S, Bednarek P, Tsuda K.
Gene expression evolution in pattern-triggered immunity within Arabidopsis thaliana and across Brassicaceae species.
Plant Cell (2021) doi: 10.1093/plcell/koab073.
Bellegarde F, Sakakibara H.
Nitrate-Dependent Modulation of Root System Architecture in Maize: A Balance between Strigolactone and Auxin Pathways.
Plant Cell Physiology (2021) doi: 10.1093/pcp/pcab032.
Umeda M, Ikeuchi M, Ishikawa M, Ito T, Nishihama R, Kyozuka J, Torii KU, Satake A, Goshima G, Sakakibara H.
Plant stem cell research is uncovering the secrets of longevity and persistent growth.
Plant Journal (2021) doi: 10.1111/tpj.15184.
2020
Agata A, Ando K, Ota S, Kojima M, Takebayashi Y, Takehara S, Doi K, Ueguchi-Tanaka M, Suzuki T, Sakakibara H, Matsuoka M, Ashikari M, Inukai Y, Kitano H, Hobo T.
Diverse panicle architecture results from various combinations of Prl5/GA20ox4 and Pbl6/APO1 alleles.
Communications Biology (2020) doi: 10.1038/s42003-020-1036-8.
Nakamichi N, Kudo T, Makita N, Kiba T, Kinoshita T, Sakakibara H.
Flowering time control in rice by introducing Arabidopsis clock-associated PSEUDO-RESPONSE REGULATOR 5.
Biosci Biotechnol Biochem (2020) doi: 10.1080/09168451.2020.1719822.
Ueda Y, Kiba T, Yanagisawa S.
Nitrate-inducible NIGT1 proteins modulate phosphate uptake and starvation signalling via transcriptional regulation of SPX genes.
Plant Journal (2020) doi: 10.1111/tpj.14637.
Qi X, Takahashi H, Kawasaki Y, Ohta Y, Isozaki M, Kojima M, Takebayashi Y, Sakakibara H, Imanishi S, Chen X, Nakazono M.
Differences in xylem development between Dutch and Japanese tomato (Solanum lycopersicum) correlate with cytokinin levels in hypocotyls.
Annals of Botany (2020) doi: 10.1093/aob/mcaa094.
Okada K, Wada M, Takebayashi Y, Kojima M, Sakakibara H, Nakayasu M, Mizutani M, Nakajima M, Moriya S, Shimizu T, Abe K.
Columnar growth phenotype in apple results from gibberellin deficiency by ectopic expression of a dioxygenase gene.
Tree Physiology (2020) doi: 10.1093/treephys/tpaa049.
Tsutsui H, Yanagisawa N, Kawakatsu Y, Ikematsu S, Sawai Y, Tabata R, Arata H, Higashiyama T, Notaguchi M.
Micrografting device for testing systemic signaling in Arabidopsis.
Plant Journal. (2020) doi: 10.1111/tpj.14768.
Shikanai Y, Yoshida R, Hirano T, Enomoto Y, Li B, Asada M, Yamagami M, Yamaguchi K, Shigenobu S, Tabata R, Sawa S, Okada H, Ohya Y, Kamiya T, Fujiwara T.
Callose Synthesis Suppresses Cell Death Induced by Low-Calcium Conditions in Leaves.
Plant Physiology. (2020) doi: 10.1104/pp.19.00784.
Kimura H, Hashimoto-Sugimoto M, Iba K, Terashima I, Yamori W.
Improved stomatal opening enhances photosynthetic rate and biomass production in fluctuating light.
J Exp Bot. (2020) doi: 10.1080/09168451.2020.1719822.
Muszynski MG, Moss-Taylor L, Chudalayandi S, Cahill J, Del Valle-Echevarria AR, Alvarez-Castro I, Petefish A, Sakakibara H, Krivosheev DM, Lomin SN, Romanov GA, Thamotharan S, Dam T, Li B, Brugière N.
The Maize Hairy Sheath Frayed1 (Hsf1) Mutation Alters Leaf Patterning through Increased Cytokinin Signaling.
Plant Cell (2020) doi: 10.1105/tpc.19.00677.
Maruyama K, Urano K, Kusano M, Sakurai T, Takasaki H, Kishimoto M, Yoshiwara K, Kobayashi M, Kojima M, Sakakibara H, Saito K, Shinozaki K.
Metabolite/phytohormone-gene regulatory networks in soybean organs under dehydration conditions revealed by integration analysis.
Plant Journal (2020) doi: 10.1111/tpj.14719.
Fukushima A, Kuroha T, Nagai K, Hattori Y, Kobayashi M, Nishizawa T, Kojima M, Utsumi Y, Oikawa A, Seki M, Sakakibara H, Saito K, Ashikari M, Kusano M.
Metabolite and Phytohormone Profiling Illustrates Metabolic Reprogramming as an Escape Strategy of Deepwater Rice during Partially Submerged Stress.
Metabolites (2020) doi: 10.3390/metabo10020068.
Anur RM, Mufithah N, Sawitri WD, Sakakibara H, Sugiharto B.
Overexpression of Sucrose Phosphate Synthase Enhanced Sucrose Content and Biomass Production in Transgenic Sugarcane.
Plants (2020) doi: 10.3390/plants9020200.
Amano R, Nakayama H, Momoi R, Omata E, Gunji S, Takebayashi Y, Kojima M, Ikematsu S, Ikeuchi M, Iwase A, Sakamoto T, Kasahara H, Sakakibara H, Ferjani A, Kimura S.
Molecular Basis for Natural Vegetative Propagation via Regeneration in North American Lake Cress, Rorippa aquatica (Brassicaceae).
Plant Cell Physiology (2020) doi: 10.1093/pcp/pcz202.
Perez-Alonso MM, Guerrero-Galan C, Scholz SS, Kiba T, Sakakibara H, Ludwig-Muller J, Krapp A, Oelmuller R, Vicente-Carbajosa J, Pollmann S.
Harnessing symbiotic plant-fungus interactions to unleash hidden forces from extreme plant ecosystems.
J Exp Bot. (2020) doi: 10.1093/jxb/eraa040.
2019
Ueda Y, Kiba T, Yanagisawa S.
Nitrate-inducible NIGT1 Proteins Modulate Phosphate Uptake and Starvation Signaling via Transcriptional Regulation of SPX Genes.
Plant Journal (2019) doi: 10.1111/tpj.14637.
Ohashi-Ito K, Iwamoto K, Nagashima Y, Kojima M, Sakakibara H, Fukuda H.
A Positive Feedback Loop Comprising LHW-TMO5 and Local Auxin Biosynthesis Regulates Initial Vascular Development in Arabidopsis Roots.
Plant Cell Physiology (2019) doi: 10.1093/pcp/pcz156.
Amano R, Nakayama H, Momoi R, Omata E, Gunji S, Takebayashi Y, Kojima M, Ikematsu S, Ikeuchi M, Iwase A, Sakamoto T, Kasahara H, Sakakibara H, Ferjani A, Kimura S.
Molecular basis for natural vegetative propagation via regeneration in North American lake cress, Rorippa aquatica (Brassicaceae).
Plant Cell Physiology (2019) doi: 10.1093/pcp/pcz202.
Yoshida S, Kim S, Wafula EK, Tanskanen J, Kim YM, Honaas L, Yang Z, Spallek T, Conn CE, Ichihashi Y, Cheong K, Cui S, Der JP, Gundlach H, Jiao Y, Hori C, Ishida JK, Kasahara H, Kiba T, Kim MS, Koo N, Laohavisit A, Lee YH, Lumba S, McCourt P, Mortimer JC, Mutuku JM, Nomura T, Sasaki-Sekimoto Y, Seto Y, Wang Y, Wakatake T, Sakakibara H, Demura T, Yamaguchi S, Yoneyama K, Manabe RI, Nelson DC, Schulman AH, Timko MP, dePamphilis CW, Choi D, Shirasu K.
Genome Sequence of Striga asiatica Provides Insight into the Evolution of Plant Parasitism.
Current Biology (2019) doi: 10.1016/j.cub.2019.07.086.
Aki SS, Mikami T, Naramoto S, Nishihama R, Ishizaki K, Kojima M, Takebayashi Y, Sakakibara H, Kyozuka J, Kohchi T, Umeda M.
Cytokinin Signaling Is Essential for Organ Formation in Marchantia polymorpha.
Plant Cell Physiology (2019) doi: 10.1093/pcp/pcz100.
Tissot N, Robe K, Gao F, Grant-Grant S, Boucherez J, Bellegarde F, Maghiaoui A, Marcelin R, Izquierdo E, Benhamed M, Martin A, Vignols F, Roschzttardtz H, Gaymard F, Briat JF, Dubos C.
Transcriptional integration of the responses to iron availability in Arabidopsis by the bHLH factor ILR3.
New Phytologist (2019) doi: 10.1111/nph.15753.
Bellegarde F, Maghiaoui A, Boucherez J, Krouk G, Lejay L, Bach L, Gojon A, Martin A.
The Chromatin Factor HNI9 and ELONGATED HYPOCOTYL5 Maintain ROS Homeostasis under High Nitrogen Provision.
Plant Physiology (2019) doi: 10.1104/pp.18.01473.
Kiba T, Takebasyashi Y, Kojima M, Sakakibara H.
Sugar-induced de novo cytokinin biosynthesis contributes to Arabidopsis growth under elevated CO2.
Scientific Reports (2019) doi: 10.1038/s41598-019-44185-4.
Yamane H, Wada M, Honda C, Matsuura T, Ikeda Y, Hirayama T, Osako Y, Gao-Takai M, Kojima M, Sakakibara H, Tao R.
Overexpression of Prunus DAM6 inhibits growth, represses bud break competency of dormant buds and delays bud outgrowth in apple plants.
PLoS One (2019) doi: 10.1371/journal.pone.0214788. eCollection 2019.
Toda E, Koiso N, Takebayashi A, Ichikawa M, Kiba T, Osakabe K, Osakabe Y, Sakakibara H, Kato N, Okamoto T.
An efficient DNA- and selectable-marker-free genome-editing system using zygotes in rice.
Nature Plants (2019) doi: 10.1038/s41477-019-0386-z.
Kitagawa M, Tomoi T, Fukushima T, Sakata Y, Sato M, Toyooka K, Fujita T, Sakakibara H.
Abscisic Acid Acts as a Regulator of Molecular Trafficking through Plasmodesmata in the Moss Physcomitrella patens.
Plant Cell Physiology (2019) doi: 10.1093/pcp/pcy249.
Mizokami Y, Noguchi K, Kojima M, Sakakibara H, Terashima I.
Effects of instantaneous and growth CO2 levels and abscisic acid on stomatal and mesophyll conductances.
Plant Cell Environment (2019) doi: 10.1111/pce.13484.
Hirakawa Y, Uchida N, Yamaguchi YL, Tabata R, Ishida S, Ishizaki K, Nishihama R, Kohchi T, Sawa S, Bowman JL.
Control of proliferation in the haploid meristem by CLE peptide signaling in Marchantia polymorpha.
PLoS Genetics (2019) doi: 10.1371/journal.pgen.1007997.
Wan L, Koeck M, Williams SJ, Ashton AR, Lawrence GJ, Sakakibara H, Kojima M, Böttcher C, Ericsson DJ, Hardham AR, Jones DA, Ellis JG, Kobe B, Dodds PN.
Structural and functional insights into the modulation of the activity of a flax cytokinin oxidase by flax rust effector AvrL567-A.
Molecular Plant Pathology (2019) doi: 10.1111/mpp.12749.
Kimata Y, Kato T, Higaki T, Kurihara D, Yamada T, Segami S, Morita MT, Maeshima M, Hasezawa S, Higashiyama T, Tasaka M, Ueda M.
Polar vacuolar distribution is essential for accurate asymmetric division of Arabidopsis zygotes.
Proc Natl Acad Sci U S A. (2019) doi: 10.1073/pnas.1814160116.
Kudo M, Kidokoro S, Yoshida T, Mizoi J, Kojima M, Takebayashi Y, Sakakibara H, Fernie AR, Shinozaki K, Yamaguchi-Shinozaki K.
A gene-stacking approach to overcome the trade-off between drought stress tolerance and growth in Arabidopsis.
Plant Journal (2019) doi: 10.1111/tpj.14110.
Okabe Y, Yamaoka T, Ariizumi T, Ushijima K, Kojima M, Takebayashi Y, Sakakibara H, Kusano M, Shinozaki Y, Pulungan SI, Kubo Y, Nakano R, Ezura H.
Aberrant Stamen Development is Associated with Parthenocarpic Fruit Set Through Up-Regulation of Gibberellin Biosynthesis in Tomato.
Plant Cell Physiology (2019) doi: 10.1093/pcp/pcy184.
Yang J, Cho LH, Yoon J, Yoon H, Wai AH, Hong WJ, Han M, Sakakibara H, Liang W, Jung KH, Jeon JS, Koh HJ, Zhang D, An G.
Chromatin interacting factor OsVIL2 increases biomass and rice grain yield.
Plant Biotechnology Journal (2019) doi: 10.1111/pbi.12956.
2018
Kuroha T, Nagai K, Gamuyao R, Wang DR, Furuta T, Nakamori M, Kitaoka T, Adachi K, Minami A, Mori Y, Mashiguchi K, Seto Y, Yamaguchi S, Kojima M, Sakakibara H, Wu J, Ebana K, Mitsuda N, Ohme-Takagi M, Yanagisawa S, Yamasaki M, Yokoyama R, Nishitani K, Mochizuki T, Tamiya G, McCouch SR, Ashikari M.
Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding.
Science (2019) doi: 10.1126/science.aat1577.
Ohashi M, Ishiyama K, Kojima S, Konishi N, Sasaki K, Miyao M, Hayakawa T, Yamaya T.
Outgrowth of Rice Tillers Requires Availability of Glutamine in the Basal Portions of Shoots.
Rice (2018) doi: 10.1186/s12284-018-0225-2.
Okamoto Y, Suzuki T, Sugiura D, Kiba T, Sakakibara H, Hachiya T.
Shoot nitrate underlies a perception of nitrogen satiety to trigger local and systemic signaling cascades in Arabidopsis thaliana.
Soil Science and Plant Nutrition (2018) doi: 10.1080/00380768.2018.1537643.
Maeda Y, Konishi M, Kiba T, Sakuraba Y, Sawaki N, Kurai T, Ueda Y, Sakakibara H, Yanagisawa S.
A NIGT1-centred transcriptional cascade regulates nitrate signalling and incorporates phosphorus starvation signals in Arabidopsis.
Nat Commun. (2018) doi: 10.1038/s41467-018-03832-6.
Kiba T, Inaba J, Kudo T, Ueda N, Konishi M, Mitsuda N, Takiguchi Y, Kondou Y, Yoshizumi T, Ohme-Takagi M, Matsui M, Yano K, Yanagisawa S, Sakakibara H.
Repression of Nitrogen-Starvation Responses by Members of the Arabidopsis GARP-Type Transcription Factor NIGT1/HRS1 Subfamily.
Plant Cell (2018) doi:10.1105/tpc.17.00810.
2017
Hachiya T, Okamoto Y.
Simple Spectroscopic Determination of Nitrate, Nitrite, and Ammonium in Arabidopsis thaliana. Bio-Protocol (2017) doi: 10.21769/BioProtoc.2280.
Osugi A, Kojima M, Takebayashi Y, Ueda N, Kiba T, Sakakibara H.
Systemic transport of trans-zeatin and its precursor have differing roles in shoots of Arabidopsis. Nature Plants (2017) 3: 17112. doi: 10.1038/nplants.2017.112.
Itouga M, Hayatsu M, Sato M, Tsuboi Y, Kato Y, Toyooka K, Suzuki S, Nakatsuka S, Kawakami S, Kikuchi J, Sakakibara H.
Protonema of the moss Funaria hygrometrica can function as a lead (Pb) adsorbent. PLoS ONE (2017) 12: e0189726.
Ikeuchi M, Iwase A, Rymen B, Lambolez A, Kojima M, Takebayashi Y, Heyman J, Watanabe S, Seo M, De Veylder L, Sakakibara H, Sugimoto K.
Wounding triggers callus formation via dynamic hormonal and transcriptional changes. Plant Physiol. (2017) 175:1158-1174.
Nelissen H, Sun XH, Rymen B, Jikumaru Y, Kojima M, Takebayashi Y, Abbeloos R, Demuynck K, Storme V, Vuylsteke M, De Block J, Herman D, Coppens F, Maere S, Kamiya Y, Sakakibara H, Beemster GTS, Inzé D.
The reduction in maize leaf growth under mild drought affects the transition between cell division and cell expansion and cannot be restored by elevated gibberellic acid levels. Plant Biotechnol J. (2017) doi: 10.1111/pbi.12801.
Hillmer RA, Tsuda K, Rallapalli G, Asai S, Truman W, Papke MD, Sakakibara H, Jones JDG, Myers CL, Katagiri F.
The highly buffered Arabidopsis immune signaling network conceals the functions of its components. PLoS Genet. (2017) 13:e1006639.
Spallek T, Melnyk CW, Wakatake T, Zhang J, Sakamoto Y, Kiba T, Yoshida S, Matsunaga S, Sakakibara H, Shirasu K.
Interspecies hormonal control of host root morphology by parasitic plants. Proc Natl Acad Sci U S A. (2017) 114:5283-5288.
Kang J, Lee Y, Sakakibara H, Martinoia E.
Cytokinin Transporters: GO and STOP in Signaling. Trends Plant Sci. (2017) 22:455-461.
Hu B, Sakakibara H, Takebayashi Y, Peters FS, Schumacher J, Eiblmeier M, Arab L, Kreuzwieser J, Polle A, Rennenberg H.
Mistletoe infestation mediates alteration of the phytohormone profile and anti-oxidative metabolism in bark and wood of its host Pinus sylvestris. Tree Physiol. (2017) 37:676-691.
Arnaud D, Lee S, Takebayashi Y, Choi D, Choi J, Sakakibara H, Hwang I.
Cytokinin-mediated regulation of reactive oxygen species homeostasis modulates stomatal immunity in Arabidopsis. Plant Cell. (2017) 29:543-559.
Gamuyao R, Nagai K, Ayano M, Mori Y, Minami A, Kojima M, Suzuki T, Sakakibara H, Higashiyama T, Ashikari M, Reuscher S.
Hormone distribution and transcriptome profiles in bamboo shoots provide insights on bamboo stem emergence and growth. Plant Cell Physiol. (2017) 58:702-716.
Ohashi M, Ishiyama K, Kojima S, Kojima M, Sakakibara H, Yamaya T, Hayakawa T.
Lack of cytosolic glutamine synthetase1;2 activity reduces nitrogen-dependent biosynthesis of cytokinin required for axillary bud outgrowth in rice seedlings. Plant Cell Physiol. (2017) 58:679-690.
Hachiya T, Sakakibara H.
Interactions between nitrate and ammonium in their uptake, allocation, assimilation, and signaling in plants. J Exp Bot. (2017) 68:2501-2512.
Lo SF, Ho TD, Liu YL, Jiang MJ, Hsieh KT, Chen KT, Yu LC, Lee MH, Chen CY, Huang TP, Kojima M, Sakakibara H, Chen LJ, Yu SM.
Ectopic expression of specific GA2 oxidase mutants promotes yield and stress tolerance in rice. Plant Biotechnol J. (2017) 15:850-864.
2016
Hachiya T, Ueda N, Kitagawa M, Hanke G, Suzuki A, Hase T, Sakakibara H.
Arabidopsis root-type ferredoxin:NADP(H) oxidoreductase 2 is involved in detoxification of nitrite in roots. Plant Cell Physiol. (2016) 57: 2440-2450.
Nakamichi N, Takao S, Kudo T, Kiba T, Wang Y, Kinoshita T, Sakakibara H
Improvement of Arabidopsis biomass and cold, drought and salinity stress tolerance by modified circadian clock-associated PSEUDO-RESPONSE REGULATORs. Plant Cell Physiol. (2016) 57: 1085-1097.
Sugiura D, Kojima M, Sakakibara H
Phytohormonal regulation of biomass allocation and morphological and physiological traits of leaves in response to environmental changes in Polygonum cuspidatum. Front. Plant Sci. (2016) 7: 1189
Immanen J, Nieminen K, Smolander OP, Kojima M, Serra JA, Koskinen P, Zhang J, Elo A, Mahonen AP, Street N, Bhalerao RP, Paulin L, Auvinen P, Sakakibara H, Helariutta Y
Cytokinin and auxin display distinct but interconnected distribution and signaling profiles to stimulate cambial activity. Curr. Biol. (2016) 26: 1990-1997.
Hibara K, Isono M, Mimura M, Sentoku N, Kojima M, Sakakibara H, Kitomi Y, Yoshikawa T, Itoh J, Nagato Y.
Jasmonate regulates juvenile-to-adult phase transition in rice. Development (2016) 143: 3407-3416.
Ybanez RHD, Leesombun A, Nishimura M, Matsubara R, Kojima M, Sakakibara H, Nagamune K, Nishikawa Y In vitro and in vivo effects of the phytohormone inhibitor fluridone against Neospora caninum infection. Parasitol. Int. (2016) 65: 319-322.
Yasuda M, Miwa H, Masuda S, Takebayashi Y, Sakakibara H, Okazaki S
Effector-triggered immunity determines host genotype-specific incompatibility in legume-rhizobium symbiosis. Plant Cell Physiol. (2016) 57: 1791-1800.
Yamashita Y, Ota M, Inoue Y, Hasebe Y, Okamoto M, Inukai T, Masuta C, Sakihama Y, Hashidoko Y, Kojima M, Sakakibara H, Inage Y, Takahashi K, Yoshihara T, Matsuura H
Chemical promotion of endogenous amounts of ABA in Arabidopsis thaliana by a natural product, theobroxide. Plant Cell Physiol. (2016) 57: 986-999.
Saeki N, Kawanabe T, Ying H, Shimizu M, Kojima M, Abe H, Okazaki K, Kaji M, Taylor JM, Sakakibara H, Peacock WJ, Dennis ES, Fujimoto R
Molecular and cellular characteristics of hybrid vigour in a commercial hybrid of Chinese cabbage. BMC Plant Biol. (2016) 16: 45.
Moriyama U, Tomioka R, Kojima M, Sakakibara H, Takenaka C
Aluminum effect on starch, soluble sugar, and phytohormone in roots of Quercus serrata Thunb. seedlings. Trees-Struct Funct. (2016) 30: 405-413.
Monda K, Araki H, Kuhara S, Ishigaki G, Akashi R, Negi J, Kojima M, Sakakibara H, Takahashi S, Hashimoto-Sugimoto M, Goto N, Iba K
Enhanced stomatal conductance by a spontaneous Arabidopsis tetraploid, Me-0, results from increased stomatal size and greater stomatal aperture. Plant Physiol. (2016) 170: 1435-1444.
Mikami K, Mori IC, Matsuura T, Ikeda Y, Kojima M, Sakakibara H, Hirayama T
Comprehensive quantification and genome survey reveal the presence of novel phytohormone action modes in red seaweeds. J Appl. Phycol. (2016) 28: 2539-2548.
Kim H, Kojima M, Choi D, Park S, Matsui M, Sakakibara H, Hwang I
Overexpression of INCREASED CAMBIAL ACTIVITY, a putative methyltransferase, increases cambial activity and plant growth. J. Integr. Plant Biol. (2016) 58: 874-889.
Huu CN, Kappel C, Keller B, Sicard A, Takebayashi Y, Breuninger H, Nowak MD, Baurle I, Himmelbach A, Burkart M, Ebbing-Lohaus T, Sakakibara H, Altschmied L, Conti E, Lenhard M
Presence versus absence of CYP734A50 underlies the style-length dimorphism in primroses. eLife 2016, 5: e17956
2015
Radhika V, Ueda N, Tsuboi Y, Kojima M, Kikuchi J, Kudo T, Sakakibara H
Methylated cytokinins from the phytopathogen Rhodococcus fascians mimic plant hormone activity. Plant Physiol. (2015) 169: 1118-1126.
Osugi A, Sakakibara H
Q&A: How do plants respond to cytokinins and what is their importance? BMC Biol. (2015) 13. 102.
Tsugeki R, Tanaka-Sato N, Maruyama N, Terada S, Kojima M, Sakakibara H, Okada K
CLUMSY VEIN, the Arabidopsis DEAH-box Prp16 ortholog, is required for auxin-mediated development. Plant J. (2015) 81: 183-197.
Takeda N, Handa Y, Tsuzuki S, Kojima M, Sakakibara H, Kawaguchi M
Gibberellins interfere with symbiosis signaling and gene expression and alter colonization by arbuscular mycorrhizal fungi in Lotus japonicus. Plant Physiol. (2015) 167: 545-557.
Sugiyama A, Fukuda S, Takanashi K, Yoshioka M, Yoshioka H, Narusaka Y, Narusaka M, Kojima M, Sakakibara H, Shitan N, Sato S, Tabata S, Kawaguchi M, Yazaki K
Molecular characterization of LjABCG1, an ATP-binding cassette protein in Lotus japonicus. PLoS One 2015, 10: e0139127
Sugiura D, Sawakami K, Kojima M, Sakakibara H, Terashima I, Tateno M
Roles of gibberellins and cytokinins in regulation of morphological and physiological traits in Polygonum cuspidatum responding to light and nitrogen availabilities. Funct. Plant Biol. (2015) 42: 397-409.
Song XJ, Kuroha T, Ayano M, Furuta T, Nagai K, Komeda N, Segami S, Miura K, Ogawa D, Kamura T, Suzuki T, Higashiyama T, Yamasaki M, Mori H, Inukai Y, Wu J, Kitano H, Sakakibara H, Jacobsen SE, Ashikari M
Rare allele of a previously unidentified histone H4 acetyltransferase enhances grain weight, yield, and plant biomass in rice. Pro. Natl. Acad. Sci. USA (2015) 112: 76-81.
Shinozaki Y, Hao SH, Kojima M, Sakakibara H, Ozeki-Iida Y, Zheng Y, Fei ZJ, Zhong SL, Giovannoni JJ, Rose JK, Okabe Y, Heta Y, Ezura H, Ariizumi T
Ethylene suppresses tomato (Solanum lycopersicum) fruit set through modification of gibberellin metabolism. Plant J. (2015) 83: 237-251.
Ohtani M, Takebayashi A, Hiroyama R, Xu B, Kudo T, Sakakibara H, Sugiyama M, Demura T
Cell dedifferentiation and organogenesis in vitro require more snRNA than does seedling development in Arabidopsis thaliana. J. Plant Res. (2015) 128: 371-380.
Nomura T, Itouga M, Kojima M, Kato Y, Sakakibara H, Hasezawa S
Copper mediates auxin signalling to control cell differentiation in the copper moss Scopelophila cataractae. J. Exp. Bot. (2015) 66: 1205-1213.
Mizokami Y, Noguchi K, Kojima M, Sakakibara H, Terashima I
Mesophyll conductance decreases in the wild type but not in an ABA-deficient mutant (aba1) of Nicotiana plumbaginifolia under drought conditions. Plant Cell Environ. (2015) 38: 388-398.
Matsubara R, Aonuma H, Kojima M, Tahara M, Andrabi SBA, Sakakibara H, Nagamune K
Plant hormone salicylic acid produced by a malaria parasite controls host immunity and cerebral malaria outcome. PLoS One (2015) 10. e0140559.
Li WQ, Yoshida A, Takahashi M, Maekawa M, Kojima M, Sakakibara H, Kyozuka J
SAD1, an RNA polymerase I subunit A34.5 of rice, interacts with Mediator and controls various aspects of plant development. Plant J. (2015) 81: 282-291.